Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2478 ATGTTTCAAGAGGATCTTTTTGTCATAGAAGCCAAGCAGAATACAAAGTTGAGAATGGGCAACTGTAGACAACTACTACAACTGAAAAGGCAAAGACATGGTAGAGGTTCTTCTACGAGCATCACCTCCACCTCACTCTTCTTCTTATCCGAGAATTTTGTCGTACAATGCAGGGCAGTGTCAGGAAGAACATTGGTGAAGTGCTCCTTGGAACTCCCAAGTAAGATTCTGACCAAGCATGTCTTATCTGGGCTTGCTGCTTCCTTGATATTTATTTCTCCATCAAATCAGTCTGTTGCAGCAGATCTATCTCGTGCACAAAATAATATATGCCAACTTGCCAGTGCCAGTGAGAATGCAGTTACTTCACCATTCGAGAATGAAAAAGGTTCAAATCTAATGATGATGAGAGGAATGACAGCCAAGAATTTTGACCCTGTAAGATATTCTGGAAGATGGTTTGAAGTTGCTTCACTTAAACGTGGATTTGCCGGACAAGGCCAAGAAGACTGTCATTGCACTCAGGGTGTATATACTTTTGATAGGGAAGCACCAGCTATCCAAGTTGATACCTTTTGTGTTCATGGAGGCCCTAATGGATTTATAACTGGAATTAGGGGAAGGGTTCAATGTCTTTCAGAAGGAGATTCGGAGAAAACTGAGACACAGCTAGAGAAGCAGGAAATGATAAAAGAAAAATGCTATCTCCGCTTTCCTACATTGCCATTCATTCCCAAGGAACCTTATGACGTGATTGCTACTGATTATGACAATTTCTCTCTTGTTTCAGGAGCTAAGGATCAAAGTTTTATTCAGATATACTCAAGGACACCTAACCCTGGAGCTGAATTTATCGAGAAATACAAGTCTTACCTTGCAAACTTTGGATATGATCCAAGCAAAATTAAAGATACACCACAGGATTGTGAAGTCATGTCCAATAGTCAGTTGGCAGCTATGATGTCTATGTCTGGAATGCAGCAGGCACTTACAAACCAATTTCCTGATCTAGGACTGAACTCCCCTATTGAATTTAATCCCTTCACAAGTGTATTTGACACTTTGAAGAAGCTTCTTGAGCTTTATTTTAAGCAGTAA 1098 0.4035 MFQEDLFVIEAKQNTKLRMGNCRQLLQLKRQRHGRGSSTSITSTSLFFLSENFVVQCRAVSGRTLVKCSLELPSKILTKHVLSGLAASLIFISPSNQSVAADLSRAQNNICQLASASENAVTSPFENEKGSNLMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDREAPAIQVDTFCVHGGPNGFITGIRGRVQCLSEGDSEKTETQLEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFSLVSGAKDQSFIQIYSRTPNPGAEFIEKYKSYLANFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLNSPIEFNPFTSVFDTLKKLLELYFKQ 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2478 365 SUPERFAMILY Lipocalins 140 320 IPR012674 -
Aed3g2478 365 Pfam Lipocalin-like domain 147 307 IPR000566 -
Aed3g2478 365 Gene3D - 139 321 IPR012674 -
Aed3g2478 365 PANTHER CHLOROPLASTIC LIPOCALIN 54 364 - -
Aed3g2478 365 ProSitePatterns Lipocalin signature. 143 156 IPR022272 -
Aed3g2478 365 PANTHER LIPOCALIN 54 364 IPR002345 GO:0036094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2478 - - gmx:100787880 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2478 3 27338192 27341710 Aed3g2478 3 27338192 27341710 ECH