Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2461 ATGGGTGTCCTCGGAACAATGGCAAGACATTTGGACACTATAATAGGGCCTGGAGTGATGCTTCTCTATCCTCTGTTTCCCATATGGGGATACCTGAAGCTTATGTTTTGCGTGTGGTTGGTACTGCCAAAGTTCAATGGAGCGGCTTACATATATGAGAATTATGTGAGGCAATACATAAAGAATATTGGAATAAGAAGTTCCAGTGAGGAGGATCAGTACAACAAGGTTCTTCACATGATGAGCTTCGATGCAAGGAAAGCAGTTGAACGCTATATCGATCAATATGGCCCCAATGCCTTTCAGAGAGTTGTCTCAGCGGTATATATATAA 333 0.4234 MGVLGTMARHLDTIIGPGVMLLYPLFPIWGYLKLMFCVWLVLPKFNGAAYIYENYVRQYIKNIGIRSSSEEDQYNKVLHMMSFDARKAVERYIDQYGPNAFQRVVSAVYI 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2461 110 Pfam TB2/DP1, HVA22 family 22 59 IPR004345 -
Aed3g2461 110 PANTHER HVA22-LIKE PROTEINS 26 107 IPR004345 -
Aed3g2461 110 PANTHER HVA22-LIKE PROTEIN F 26 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2461 Aed-Chr3 27244056 27245001 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2461 K17279 - gmx:100779435 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2549 4 27448168 27450324 Aed3g2461 3 27244056 27245001 PCT
Aed10g0168 10 1334703 1336506 Aed3g2461 3 27244056 27245001 PCT