Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2258 ATGGAGAACTTCCCCGTTATCAACTTGGGCAATCTCAACAGTGAGGGGAGGAAGGCTACCCTTGACCAGATTGAAGATGCTTGCCAGAACTGGGGATTTTTCGAGTTGGTGAATCATGGAATACCCCTTGAGCTTTTGGATACTGTGGAAAGGTTGACTAAAGAGCATTATAGGCACTGCATGGAGAAGAGGTTCGAGGAGGCAATGGGAAACAAGGGGTTAGAAATTGAAGTGAAGGACATGGATTGGGAGAGCACCTTCTTCTTGCGCCATCTCCCAACCTCCAACATCTCTCAAATTCCTGATCTCACCCAAGAGTACCGGGATGCAATGAAGGAATTTGCACAGAAATTGGAGAAACTTGCAGAAGAGTTGCTAGACCTGTTATGTGAAAATCTTGGAATAGAGAAAGGGTACTTGAAGAAGGCATTTTATGGATCAAAGGGTCCTAATTTTGGGACAAAGGTGGCAAACTACCCAGCGTGCCCAAAGCCAGAGTTGGTTAAGGGTCTCCGTGCTCATACGGATGCTGGTGGGATCATCCTTCTCTTGCAAGATGACAAAGTCAGTGGCCTTCAGCTTCTTAAAGATGGCCAATGGATCGATGTGCCTCCGATGCGCCATTCCATTGTTGTTAACCTCGGTGACCAAATTGAGGTCATTACCAATGGAAAATACAAGAGTGTGGAGCATCGTGTGATTGCTCGAACTGATGGGACAAGAATGTCTGTAGCCTCATTCTACAACCCTGCCAGTGATGCTGTTATCTACCCTGCACCACCATTGTTGGAGACAAAGGCAGAGGATGCAGAACAAGTGTACCCAAAATTTGTATTTGAGGATTACATGAAGCTCTATGCTGCGCTCAAGTTCCAACCAAAGGAGCCCAGATTTCAAGCCATGAAGGCCGTTAACTCATTTTAG 924 0.4621 MENFPVINLGNLNSEGRKATLDQIEDACQNWGFFELVNHGIPLELLDTVERLTKEHYRHCMEKRFEEAMGNKGLEIEVKDMDWESTFFLRHLPTSNISQIPDLTQEYRDAMKEFAQKLEKLAEELLDLLCENLGIEKGYLKKAFYGSKGPNFGTKVANYPACPKPELVKGLRAHTDAGGIILLLQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQIEVITNGKYKSVEHRVIARTDGTRMSVASFYNPASDAVIYPAPPLLETKAEDAEQVYPKFVFEDYMKLYAALKFQPKEPRFQAMKAVNSF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2258 307 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 303 - -
Aed3g2258 307 Gene3D - 1 307 IPR027443 -
Aed3g2258 307 SUPERFAMILY Clavaminate synthase-like 3 302 - -
Aed3g2258 307 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 150 250 IPR005123 -
Aed3g2258 307 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 2 303 - -
Aed3g2258 307 Pfam 2OG-Fe(II) oxygenase superfamily 156 250 IPR044861 -
Aed3g2258 307 Pfam non-haem dioxygenase in morphine synthesis N-terminal 5 64 IPR026992 -
Aed3g2258 307 Coils Coil 104 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2258 Aed-Chr3 25994181 25995731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2258 4 286 Glycosyltransferase AT5G59530 31.438 8.66e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2258 K05933 - gmx:100815336 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2258 3 25994181 25995731 Aed7g1991 7 22796678 22797220 PCT