Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2208 ATGGTTTCGGTTGACAATGGTAAAGAGGAAATTGAGGAATCTAATGGAAGTAAAGTAAACGAGTTTGCTTCCATAGATATTTCAACTTCTCGAAGAACATTGGTGGGCAATGAAAACCCTCAGAGAAAGTTCCAGGGCACCACCTTGAGTTCTATTCCCAATAGGATCAACTTCTTCAAATTTGGTTCTGCATCTGCCAAATTCAACCGGCTTGCTACTTTGAAGGACCAGATTTCGCAATCGGTGCCTTCGCCCAGTTCTATCGGGTTAAGAGAGCGCTTCAGTGGCATGTTTGCTAAGAAACTTGACTGGGGTTCCCTCAAGAAGATGTGTGCAGAATGGTTTAGGGATCCAATGAACGTAGCCCTTTTTGTTTGGATCTTATCGGACCGTCCGGCCATTGGAGTTGGAATATGCATATCTTTTGCAATTGGTGCGCCTGCAGTTGCTGGTCTCTACTCCATTCTTAGCCCTCTAGGTAAAGATTTTGATTCTGAGACAGATGAAGAAGCACAGCTTCAAGATTCTGTTGCTCAGAAGCAAGAGCCACTGAGAGTGAAGTCATTTCAGAAGAAATATTCATTTGCATCCAGACAGCAACGAAGGGTTATCGAAACTAGGCCGCTGTGGAGTGGAGGAATACTTGACATATGGAATGATATTTCCCAAGCATACCTATCGCTTTTCTGTACTTTTTGTGTGTTTGGTTGGAACATGGAGAGACTTGGCTTTGGAAACATGTATGTTCACATTGCTACTTTTATGCTGTTCTGTATGGCTCCCTTTTGGATATTTATCTTGGCTGCTGTCAATATTGAGGATGAAACTGTTAGGCAGGCTCTAGTAGCTGCTGGGATCATTCTGTGTCTTTTTGGTTTACTGTATGGTGGTTTTTGGAGGATCCAAATGAGAAAAAGGTTCAATTTGCCTTCTTATAACTTCTGTTTTGGCAAGCCTTCAGCTTCTGATTGCACACTTTGGCTATGCTGTTGCTGGTGCTCTCTTGCTCAAGAAGTGCGAACTGGGAATAGCTATGATATTGTAGAAGACAAATTATACAAGAAAGGAGTTTCTTCTGGTGACCAGCAACTAATGTCACCTTTGCCTCGTGAAGATGTGGCATCAAGCAAATCTGGCACAAGTTCTCCTTTGGGTAACAACAACAACTCTTCCCCTTCTATGATAAAGCCATCTAGTCCTCTAAAGGGATATCATAGTCCAGAGAGGCCACTATCTACTGTACAAGAAGAGGTTTCTGAAAGTGGTAAAGATGGAACAATGAAACCACCAACTCCTCCATCAATACAAAGAGAATCTCCTTAG 1323 0.4255 MVSVDNGKEEIEESNGSKVNEFASIDISTSRRTLVGNENPQRKFQGTTLSSIPNRINFFKFGSASAKFNRLATLKDQISQSVPSPSSIGLRERFSGMFAKKLDWGSLKKMCAEWFRDPMNVALFVWILSDRPAIGVGICISFAIGAPAVAGLYSILSPLGKDFDSETDEEAQLQDSVAQKQEPLRVKSFQKKYSFASRQQRRVIETRPLWSGGILDIWNDISQAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFILAAVNIEDETVRQALVAAGIILCLFGLLYGGFWRIQMRKRFNLPSYNFCFGKPSASDCTLWLCCCWCSLAQEVRTGNSYDIVEDKLYKKGVSSGDQQLMSPLPREDVASSKSGTSSPLGNNNNSSPSMIKPSSPLKGYHSPERPLSTVQEEVSESGKDGTMKPPTPPSIQRESP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2208 440 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 209 341 IPR006461 -
Aed3g2208 440 MobiDBLite consensus disorder prediction 359 440 - -
Aed3g2208 440 Pfam PLAC8 family 210 340 IPR006461 -
Aed3g2208 440 MobiDBLite consensus disorder prediction 373 397 - -
Aed3g2208 440 PANTHER PLAC8 FAMILY PROTEIN-RELATED 129 436 - -
Aed3g2208 440 PANTHER PLAC8 FAMILY PROTEIN-RELATED 3 128 - -
Aed3g2208 440 PANTHER PLAC8 FAMILY PROTEIN-RELATED 129 436 - -
Aed3g2208 440 PANTHER PLAC8 FAMILY PROTEIN-RELATED 3 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2208 Aed-Chr3 25605371 25607038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2208 - - gmx:100795088 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2208 3 25605371 25607038 Aed2g1021 2 8091973 8092779 ECH
Aed3g2208 3 25605371 25607038 Aed3g2208 3 25605371 25607038 ECH
Aed7g2007 7 22890430 22892073 Aed3g2208 3 25605371 25607038 PCT