Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2182 ATGACAAAAACTGAAGAAGAAGAAGAAGAAGAAGAAGAACCAACTCATCCGAACCCTAACAACCACACTCAACACTCCACTATCGGCGATGTGGAACCCCGCGACGACGACGATGACATCGAAGAAGACGACGACGACGATGACGACGTTGTTCAGAAACCGAATCGCGGAATTCCCCAATCCGCAGCAGCGTCCAAGTTGCAGGAGCAGCGTTTCAAGGTGGAAACCCTAATGCGGCGCTTGTCGTCGGAGCTGCTTCCGATTCGAGTCCACAACGTGGTTATAAACGGCAACACGAAGACGAAGGATTGGGTGATTGAAGCGGAGCTGAAAGGCATCGAGAACGCCACCAGCATGCAGGAGCTTATGCAAGCCTCGCAAGTTGCCATTGGCAAGCTTCAGGGCCTCGAAATCTTCGATTCCTGCAAGGTTCTCCTCGAGGCAGGACCACGAGAGCTTCCAAACACTGCCAATGTCATCGTCGATGTTGTCGAAACCGATAGCAAAGTTTCCGGCGAATTCGGCGTTTATACCAAACCCTCGACTAGTTCTTGGACTGCTGAAGGTGCTCTTAAGTATAAGAACTTGTTGGGTTATGGTGATCTATGGGATGCTTCTTTGGCCTATGGTGCCAACCAAGCAACAGAGGTGAGTGTAGGGGTGTATGCCCCTCGAGTTAAAGGATTCTTGACTCCTATTGTAACACGGATATGCATGCTTTCCCAAGATTGGCAAGAATCTTCCTCATATAAAGAGCGGTTGTTGGGTGCGTCTCTTGGCTTAATCTCGACAAAGCACCATGACTTAGCATACACTCTTGGATGGCGTACCTTAACAGATCCATCTCAGATGTCATCCAGGTCTATAAGGAGGCAGCTTGGGCATGGTTTAGTGTCATCTTTGAAGTATACATTTAAAATTGATAGGAGAAATTCTCCTATTAGGCCAACAAAAGGATATGCTTTTCTTTCCACCACTCATGTTGGTGGCCTTACCCCAGATCCCAGGAGCTTGCGGTTTCTGCGTCAGGAGTTTGATGTTCGCTTTGCTGTCCCTTTTGGGTTTTCCAATACAGCACTAAATCTTGGGATATCTGCTGGTGCTGTTTTTCCATGGGGGCATGGATTCAAAACCAAGCCATCTCCCCTTCCAGAAAGGTTTTATTTAGGTGGTGATTTTTCTCCAGTTTGCACCTTAGGAGGACCAACAACATTATGGGGATTTAAAACTAGAGGATTAGGTCCTACTGAACCTCGGAGGCAAAATAGAGATGGGTCTAATGATGACAATGATGATTCCTCTGGATGGGACTTCATTGGTGGAGATCTTGCTGTTACCGCTTTTGCAGATCTCTCTTTTGATCTTCCAATTAGGTGGTTGAGAGAACATGGAATCCATGGGCATGTTTTTTCTGGTTCTGGGAATGCTGCTAAATTAACTCAGAATGAATATAAGCACTTCTCTCCTCGGAAGTTCTTAGAATCCTTTCGAATGTCAGTGGGATGTGGAGTTGTTATTCCTACTAGACTCTTCCGGCTAGAGGGTAACTACTTCCACATACTCAGAAAGGATGAGCATGATCTTGGGAAGACTGGATTTAGGTTTAGCTTCTCAGCTCCTTCATAG 1626 0.4656 MTKTEEEEEEEEEPTHPNPNNHTQHSTIGDVEPRDDDDDIEEDDDDDDDVVQKPNRGIPQSAAASKLQEQRFKVETLMRRLSSELLPIRVHNVVINGNTKTKDWVIEAELKGIENATSMQELMQASQVAIGKLQGLEIFDSCKVLLEAGPRELPNTANVIVDVVETDSKVSGEFGVYTKPSTSSWTAEGALKYKNLLGYGDLWDASLAYGANQATEVSVGVYAPRVKGFLTPIVTRICMLSQDWQESSSYKERLLGASLGLISTKHHDLAYTLGWRTLTDPSQMSSRSIRRQLGHGLVSSLKYTFKIDRRNSPIRPTKGYAFLSTTHVGGLTPDPRSLRFLRQEFDVRFAVPFGFSNTALNLGISAGAVFPWGHGFKTKPSPLPERFYLGGDFSPVCTLGGPTTLWGFKTRGLGPTEPRRQNRDGSNDDNDDSSGWDFIGGDLAVTAFADLSFDLPIRWLREHGIHGHVFSGSGNAAKLTQNEYKHFSPRKFLESFRMSVGCGVVIPTRLFRLEGNYFHILRKDEHDLGKTGFRFSFSAPS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2182 541 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 177 539 - -
Aed3g2182 541 MobiDBLite consensus disorder prediction 1 68 - -
Aed3g2182 541 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 20 539 - -
Aed3g2182 541 MobiDBLite consensus disorder prediction 33 49 - -
Aed3g2182 541 Pfam Omp85 superfamily domain 195 538 IPR000184 GO:0019867
Aed3g2182 541 Gene3D membrane protein fhac 87 166 - -
Aed3g2182 541 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 20 539 IPR039910 -
Aed3g2182 541 MobiDBLite consensus disorder prediction 416 430 - -
Aed3g2182 541 MobiDBLite consensus disorder prediction 408 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2182 Aed-Chr3 25466457 25469997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2182 K07277 - gmx:100802876 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2182 3 25466457 25469997 Aed3g2182 3 25466457 25469997 ECH
Aed7g2031 7 23069422 23074106 Aed3g2182 3 25466457 25469997 PCT