Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2159 ATGGGAAATAACATGGTAACATACAACAAATACAAAAGTTTCATGTTCTTTATCAGAAAGTTCAAGGTCACGGAGCCAGTTCCACCTCAGGACCTTGATGAGGCGTTTTCCAAGTTCACTGGAGGAGGGTCCCACATGACCGCGGAGGAGCTCCACCGTTTCATGGTGGAGCACCAGGGTGAAGAGGAATATTCCTTATCGGATTCGGAGAAAGTTGTTGAGAAGGTTTTGCAAGAGAGAAAGACATGTCAAGAAACTGTTGAGGTTGATCAAAATAGAGAACATGAGATCACCCTTGATGAGCTCTTCCGCTTTTTGCTTCATGATGGTTCCAACGGTCCCTTGAAAGCTGAGGTACATCATGATATGGGTGCTCCATTGTCACATTATTTCATATATACAGGCCATAACTCCTATTTGACAGGGAATCAGCTCAGCAGTGACTGCAGTGAAGAACCAATCATAATGGCTTTGAAAAGAGGAGTGCGTGTTATTGAACTTGATTTATGGCCAACTTGCAATAAGCATGATATTAAAGACTCTTACCAACCCTGCCTCAGTTATCAAATGTCTAGAGTCCATAAAGGAATATGCCTTTGTTGCATCTCAATACCCAATTGCTCTTGCTTAACAGAATTCCCTTCCCCGGAATCACTAAAAAATCGAGTTATTATATCAACAAAACCCCCGAAAGAACGTTTTAAGTCCAACCGTATCAAGGACAATCCTATGCTGAATGAAAGTGATTCATCTGAAGAAGAATCATCGGGAAATGAATCTCCAGACTCCAATAAGAACGAAGTGGAGACTGAGGACACGAATGGAAGTGATCGAGATGAGGGAAATGTAAGTGCATGTGAATTTGAGCACAAACCATATCAGGAGGGTTCACCTGATTACAAACACATAATTACTATCCATAACAAGAAGCTCAAGGGTTGCCTGAAGGATAAATTGAAAACAGACGGTGAAGTTAGACGCCTAAGTTGGAGTGAGAAAACCCTTGAAAAGGCTTCAGAATCTCATGGAACAGATATTCTTAGGTTCACACAGAAAAATATCCTCAGGGTTTACCCGAGTGCAATGCGAGTCAAATCATCAAATTTCAAGCCACATATTGGATGGATGTATGGGGCTCAGATGGTTGCATTCAATATGCAGGGGCATGGCAAATCACTCTGGTTGATGCAGGGGATGTTCAAGGCAAATGGAGGCTGTGGTTATGTAAAGAAGCCTCAATTTCTAATGCAGAAGCATCAATGTGACAATGAGTTTGATCCTACAAGAATACAGTCGGTGAAGAAGACATTAAAGGTAAAAGTATACTTGGGACATGGATGGAGCTCAGATTTCAGTCCCACACACTTTGATAAGTGCTCTCCCCCAGACTTTTACACTAAGGTCCGTATTGTTGGAATGCCTGGTGATGATGCAAAGAAGAAAACAAAGGTTATGATGGACAACTGGTTTCCTGTTTGGGATGAAGAATTTGAATTCTCTTTAACTGTTCCAGAGCTTGCATTGCTTCTGATACAAGTAAAGGACAAAGATCCCGGAACGGATGACTTTGCTGGACAGACATGTTTGCCAGTGTCAGAGCTAAAACATGGATTTCGTTCAGTCCCTTTGTATAACATAAAGGGAGACAAGTTTAAATCTGTAAAGCTGTTGATGCGGTTTCAGTTTGAATAG 1692 0.4161 MGNNMVTYNKYKSFMFFIRKFKVTEPVPPQDLDEAFSKFTGGGSHMTAEELHRFMVEHQGEEEYSLSDSEKVVEKVLQERKTCQETVEVDQNREHEITLDELFRFLLHDGSNGPLKAEVHHDMGAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIMALKRGVRVIELDLWPTCNKHDIKDSYQPCLSYQMSRVHKGICLCCISIPNCSCLTEFPSPESLKNRVIISTKPPKERFKSNRIKDNPMLNESDSSEEESSGNESPDSNKNEVETEDTNGSDRDEGNVSACEFEHKPYQEGSPDYKHIITIHNKKLKGCLKDKLKTDGEVRRLSWSEKTLEKASESHGTDILRFTQKNILRVYPSAMRVKSSNFKPHIGWMYGAQMVAFNMQGHGKSLWLMQGMFKANGGCGYVKKPQFLMQKHQCDNEFDPTRIQSVKKTLKVKVYLGHGWSSDFSPTHFDKCSPPDFYTKVRIVGMPGDDAKKKTKVMMDNWFPVWDEEFEFSLTVPELALLLIQVKDKDPGTDDFAGQTCLPVSELKHGFRSVPLYNIKGDKFKSVKLLMRFQFE 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2159 563 Pfam C2 domain 437 538 IPR000008 -
Aed3g2159 563 SMART plcx_3 121 228 IPR000909 -
Aed3g2159 563 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 326 414 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed3g2159 563 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 436 562 IPR035892 -
Aed3g2159 563 Gene3D Phosphatidylinositol (PI) phosphodiesterase 196 428 IPR017946 GO:0006629|GO:0008081
Aed3g2159 563 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 195 IPR017946 GO:0006629|GO:0008081
Aed3g2159 563 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 121 170 - -
Aed3g2159 563 Gene3D - 27 112 - -
Aed3g2159 563 MobiDBLite consensus disorder prediction 258 283 - -
Aed3g2159 563 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 206 563 IPR001192 GO:0035556
Aed3g2159 563 CDD C2_PLC_like 434 563 - -
Aed3g2159 563 ProSitePatterns EF-hand calcium-binding domain. 90 102 IPR018247 -
Aed3g2159 563 SMART C2_3c 436 543 IPR000008 -
Aed3g2159 563 MobiDBLite consensus disorder prediction 230 247 - -
Aed3g2159 563 ProSiteProfiles C2 domain profile. 417 545 IPR000008 -
Aed3g2159 563 Pfam Phosphatidylinositol-specific phospholipase C, X domain 123 175 IPR000909 -
Aed3g2159 563 SUPERFAMILY PLC-like phosphodiesterases 121 417 IPR017946 GO:0006629|GO:0008081
Aed3g2159 563 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 193 - -
Aed3g2159 563 Gene3D C2 domain 431 563 IPR035892 -
Aed3g2159 563 PRINTS Phospholipase C signature 152 172 IPR001192 GO:0035556
Aed3g2159 563 PRINTS Phospholipase C signature 375 393 IPR001192 GO:0035556
Aed3g2159 563 PRINTS Phospholipase C signature 126 144 IPR001192 GO:0035556
Aed3g2159 563 PRINTS Phospholipase C signature 529 539 IPR001192 GO:0035556
Aed3g2159 563 PRINTS Phospholipase C signature 354 375 IPR001192 GO:0035556
Aed3g2159 563 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 206 563 - -
Aed3g2159 563 MobiDBLite consensus disorder prediction 230 283 - -
Aed3g2159 563 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 329 415 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed3g2159 563 SMART plcy_3 300 416 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed3g2159 563 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 193 IPR001192 GO:0035556
Aed3g2159 563 SUPERFAMILY EF-hand 3 123 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2159 Aed-Chr3 25271742 25275319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2159 3 563 Acyl Lipid Metabolism Gene Families AT2G40116 47.488 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2159 K05857 - gmx:100820253 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2051 7 23252767 23256560 Aed3g2159 3 25271742 25275319 PCT