Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2144 ATGGTTGATCTAGATTGGCAATCAAAGATGGTTCGATCCAACATGAACATGCCTCCCAAGTCCCCCAAACTCTCTCTCCCAATCCCAATCCCAATCCCCACTTTGCAACTCCCCCTTCGCCAAAACGACATCACCGCAGCGTCGTCTCCGGTTTGCGCTGCGTACGACAACTACCTCCGCCTCCCTGAGCTCAGAGCCCTCTGGGCCTCCAGTGACTACCCTAATTGGGCCAACGAGCCCATCTTAAAGCCCGCCTTACACGCCCTCGAAATCACCTTCCGGTTCCTCCTAACCGTCCTATCCGACCCAAGACCGTACGTCAACAAACGCGAATGGACCCGACGCGTCGAGTCTCTCGCCACGGCCCAAATCCAGATCATAGCCATGATGTGCGAAGACGAGGAGGAATACCCCGAGACACGTGGCAAGGCACCGGTCACTGACATTAACGGCTTTACCGGTCAAACCAGAACCTACAGCGAGGAAAGCCTACTCCCTCGCCTCGCCACGTGGCACAAATCCAGAGACGTGGCGCGGAGGATTCTTAATTCAGTGGATTTCGAAATGATGAGGTGCACGTACACCTTAGGTTTAGGAGAGGCGAATCTCGCGGGAAAGAAGATATTTCTCTACGATGGCGTTTGTAGGCCGAGCGAGATTCATTCCTTGGAGACGACGCCGTTCGATTACGTAGTAGGGAACTACGAGAACAAGACGCTGCACGCGACGCAGCAGATCGCGGAGTGTTGGACACGCGCGGTGCATAAGTTGCTGGAGAGAGTGGCGGAGTCGGTAGAGAAGAGAGAGTTGGAGAAGGCGGCGAGTGAGTGCCACGCGGTGGAGCGGATCTGGAAGTTACTAACGGAGGTTGAGGACATGCATGTGATGATGGATCCGGAGGATTTCTTGAGGCTGAAGAAGCAGTTAGGGATGAGGACGGGGGGTGGCGAAATGGTGGCGTTTTGCTTCCGATCGAGGGAGCTGGTGGAGGTGGCGAGGGTGTGCAGGGAAATGAGGCAGAAGGTGCCGGAGATATTGGAGGTGGAGGTGGACCCCACGGGTGGGCCCGGGATGATGGAGGCAGCGATGAAGGTTTACTCGGAGAAACGGTTCGAGAAGGTTCACGTTTTGCAGGGTATGCAGGCGATAGAGGCGGCGATGAAGAGGTTCTTCTACGCGTATAAACAGGTTGTGACGGTTATGATGGGGAGCTCCGAGGCCGAGTCCGAGTCCAATGGGTTGACTCAGATATTCCTTCAGCCCACTTACTTCCCTAGCTTGGATGCTGCCAAGACCTTCCTTAGTTATTACTGGGAAAATAATAATAACACTCAAAATGTGATTCCTTGGTAG 1353 0.5455 MVDLDWQSKMVRSNMNMPPKSPKLSLPIPIPIPTLQLPLRQNDITAASSPVCAAYDNYLRLPELRALWASSDYPNWANEPILKPALHALEITFRFLLTVLSDPRPYVNKREWTRRVESLATAQIQIIAMMCEDEEEYPETRGKAPVTDINGFTGQTRTYSEESLLPRLATWHKSRDVARRILNSVDFEMMRCTYTLGLGEANLAGKKIFLYDGVCRPSEIHSLETTPFDYVVGNYENKTLHATQQIAECWTRAVHKLLERVAESVEKRELEKAASECHAVERIWKLLTEVEDMHVMMDPEDFLRLKKQLGMRTGGGEMVAFCFRSRELVEVARVCREMRQKVPEILEVEVDPTGGPGMMEAAMKVYSEKRFEKVHVLQGMQAIEAAMKRFFYAYKQVVTVMMGSSEAESESNGLTQIFLQPTYFPSLDAAKTFLSYYWENNNNTQNVIPW 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2144 450 Gene3D - 239 341 - -
Aed3g2144 450 Pfam Hs1pro-1 protein C-terminus 189 440 IPR009743 -
Aed3g2144 450 Pfam Hs1pro-1 N-terminus 1 186 IPR009869 GO:0006952
Aed3g2144 450 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 446 - -
Aed3g2144 450 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 446 IPR038759 -
Aed3g2144 450 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 211 434 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2144 Aed-Chr3 25182716 25184068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2144 - - gmx:100778560 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2144 3 25182716 25184068 Aed3g2144 3 25182716 25184068 ECH
Aed7g2073 7 23428515 23429876 Aed3g2144 3 25182716 25184068 PCT