Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2133 ATGGAGGATCGGCACGCGGAGCTGACGGCGACGAGGTTATCCGATGTGGTGGACTACGTGATGCCGTACATCCACGACCCCAATGACCGCGATGCTGTGTCGCAGGCGTGCCGGCGGCACGAACTTGACTCGCTCACGCGTAAGCACGTGACGATTGCGCTATGTTACACCACCACGCCAGCCAGGCTCCGGCAACGCTTTCCGCACCTGGAGTCCCTGAAGCTGAAGGGAAAGCCGCGAGCGGCGATGTTCAACTTGATACCGGAGGATTGGGGAGGTTTCGTCACACCTTGGGTTCGAGAGATCTCTCACTACTTCAGTTGCTTGAAGTCGCTTCACTTTCGGCGTATGATTGTGAGGGATCCCGATCTTGAGGTTCTGGCTCGTACACGCGGTCATGTACTTCATGCTCTTAAACTAGATAGGTGCTCTGGATTCTCCACCGATGGTCTCCACTATATTGGTCGTTATTGCAGCCTTACTGAAAAAATTGGATCTTCTCTATGCATTGCTGGATACAGAGGACCATTGTACCTTAATCCAAAGGCAAGGAACGTAATTGGAGACAGAGGATTAGAAGTGCTTGCTTGCTGTTGTAGGAGGCTTAAAAGGCTTCGGATTGAACGAGGTGATGATGAAGAAGGTGTTGTTTCCCAGAGAGGACTAATTGCTTTGTCACATGGCTGTCCAGAGCTTGAACACTTGGCCGTTTATGTATCTGACATCACCAATGCATCTCTAGAACACATCGGTACTCACTTGAAAAACCTTCGTGATTTTCGTCTTGTCTTGCTAGACGGCGAAGAGAAAATAACCGATTTGCCACTTGACAACGGAGTGAGGGCTCTACTGAGGGGTTGTGACAAGCTCAGAAGATTTGCTCTGTATCTGAGACCTGGGGGATTGACTGATGTAGGGCTTGGTTACATAGGGCAATACAGCCCCAATGTGAGATGGATGCTTCTTGGTTATGTGGGAGAGTCTGATGCAGGGCTTTTGGAGTTCTCTAAGGGCTGCCCCAGTCTTCAGAAACTTGAAATGAGAGGATGTTCCTTTTTCAGTGAGTATGCACTTGCCATTGCTGTAACTCAACTTAATTCTCTCAGATACCTATGGGTGCAAGGCTATGGAGAATCTCCATCTGGACACGATCTTCTGGCAATGGCTCGCCCCTATTGGAACATTGAATTGATTCCTTCTAGACGCATCGTTGTTAACAATCCCCAAGAAGAGCCTGTAGTTGTTGAGCACCCGTCTCATATTCTTGCATATTACTCTCTTGCTGGCCCAAGAACTGATCTTCCACATACTGTTATACCTTTGAATCCTGCAACATATGTTGACACCTAA 1350 0.4874 MEDRHAELTATRLSDVVDYVMPYIHDPNDRDAVSQACRRHELDSLTRKHVTIALCYTTTPARLRQRFPHLESLKLKGKPRAAMFNLIPEDWGGFVTPWVREISHYFSCLKSLHFRRMIVRDPDLEVLARTRGHVLHALKLDRCSGFSTDGLHYIGRYCSLTEKIGSSLCIAGYRGPLYLNPKARNVIGDRGLEVLACCCRRLKRLRIERGDDEEGVVSQRGLIALSHGCPELEHLAVYVSDITNASLEHIGTHLKNLRDFRLVLLDGEEKITDLPLDNGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGESDAGLLEFSKGCPSLQKLEMRGCSFFSEYALAIAVTQLNSLRYLWVQGYGESPSGHDLLAMARPYWNIELIPSRRIVVNNPQEEPVVVEHPSHILAYYSLAGPRTDLPHTVIPLNPATYVDT 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2133 449 SMART LRR_CC_2 287 313 IPR006553 -
Aed3g2133 449 SMART LRR_CC_2 339 365 IPR006553 -
Aed3g2133 449 SMART LRR_CC_2 229 253 IPR006553 -
Aed3g2133 449 Pfam Transport inhibitor response 1 protein domain 68 114 IPR041101 -
Aed3g2133 449 Gene3D - 1 47 - -
Aed3g2133 449 SUPERFAMILY RNI-like 53 389 - -
Aed3g2133 449 Gene3D Ribonuclease Inhibitor 177 445 IPR032675 -
Aed3g2133 449 Gene3D Ribonuclease Inhibitor 48 170 IPR032675 -
Aed3g2133 449 Pfam F-box 14 49 IPR041567 -
Aed3g2133 449 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 13 169 - -
Aed3g2133 449 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 182 444 - -
Aed3g2133 449 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 13 169 - -
Aed3g2133 449 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 182 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2133 Aed-Chr3 25117181 25119687 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2133 K13463 - gmx:100793081 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2133 3 25117181 25119687 Aed3g2133 3 25117181 25119687 ECH
Aed7g2082 7 23514751 23518988 Aed3g2133 3 25117181 25119687 PCT