Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2119 ATGAAAACTAAAATACATGATCAAAGTATAGCAAATAAAAAACCAAAGCAAGAAGCTAAAGGTGTATCTGTCATCATCCCAAGTCCCAACACAGTAACAACTCCAAACAGCAAGCTCACATCGGAGAGGTGCATCATATCAAAGCCAGTAGCATCAACAAAGAGATTCACGCTGGCGGTCAAGGACGTTTCTGCGGCGGTGACGGCGGCGGCAGAGGAGGAACACGTGACGCTGATTTCGGACGCTGAAAACCATGCGGATGTCGAAATCCCCGACACTGCGCATCAAATTAGCACCGATTCATGGTTCCAAGTGGGGTTCGTGCTTACCACGGGCGTCAACAGCGCGTATGTGCTTGGATATTCGGGGACGATCATGGTTCCCCTGGGTTGGGTAGGGGGTGTGGTTGGTTTGATTCTCGCCACCGCAATTTCGCTCTACGCCAATGCTCTTATTGCCAGGCTCCATGAATATGGAGGAACAAGGCATATTCGTTACAGAGATCTTGCTGGATTTATATATGGTAGAAAAACTTATTCCCTCACATGGACTCTACAGTATGTCAATCTTTTCATGATTAATGCCGGCTACATCATTTTGGCTGGCTCGGCTTTAAAGGCGGCTTATGTTCTATTCAGGGAAGACGATGGGATGCAGCTTCCGTATTTTATTGCCATAGCTGGAATTGTGTGTGCAATGTTTGCCATTTGTATTCCTCATCTATCGGCTCTTGGAATTTGGCTGGGATTTTCAACAGTCTTCAGCCTAGTATACATTGTTATAGCATTTGCACTGTCAATTAAAGATGGTATAAAATCGCCACCTCGTGATTATAGCATTCCGGGGACATCAACAAGTAAAATATTTACAACAATTGGGGCATCTGCTAATCTCGTGTTTGCATATAATACAGGAATGCTTCCTGAGATACAGGCAGCCAGTTGTCAAGAACATGATGAAAGCCCTGTACTTTCAGTTTACTGTTGGAGTTCTGCCATTATACCTGGTTACTGGGCTTATGGATCTTCAACAGCAACCTATTTGATGAATGATGTGAATGGTCCAGTTTGGGCTAAAGCAATGGCCAATATTGCAGCCTTTCTTCAATCAGTAATTGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTTGGATACCAAACATGGGATCAAAGGGAGTGCCCTGGCTTTTAAGAACTTGTCATTTCGAATCTTGGTAAGAGGTGGCTACCTGACTTTAAACACATTTGTATCAGCTCTGTTGCCATTTCTTCGAGATTTCATGAGCCTCACTGGAGCTATCAGCACATTTCCCCTTACGTTTATCCTTGCAAACCATATGTACCTAGAGGCAAATGAGAACAAACTAACATCCATCCAAAAGCTCTGGCATTGGATCAATATTTGTTTCTTTGCCCTCGTGTCTGCTGCGGCAACTGTTGCTGCCCTGCGGCTTATTGCTTTAGACTCCAAAACGTACCATGTATTTGCTGATTTATGA 1503 0.4385 MKTKIHDQSIANKKPKQEAKGVSVIIPSPNTVTTPNSKLTSERCIISKPVASTKRFTLAVKDVSAAVTAAAEEEHVTLISDAENHADVEIPDTAHQISTDSWFQVGFVLTTGVNSAYVLGYSGTIMVPLGWVGGVVGLILATAISLYANALIARLHEYGGTRHIRYRDLAGFIYGRKTYSLTWTLQYVNLFMINAGYIILAGSALKAAYVLFREDDGMQLPYFIAIAGIVCAMFAICIPHLSALGIWLGFSTVFSLVYIVIAFALSIKDGIKSPPRDYSIPGTSTSKIFTTIGASANLVFAYNTGMLPEIQAASCQEHDESPVLSVYCWSSAIIPGYWAYGSSTATYLMNDVNGPVWAKAMANIAAFLQSVIALHIFASPMYEYLDTKHGIKGSALAFKNLSFRILVRGGYLTLNTFVSALLPFLRDFMSLTGAISTFPLTFILANHMYLEANENKLTSIQKLWHWINICFFALVSAAATVAALRLIALDSKTYHVFADL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2119 500 PANTHER PROLINE TRANSPORTER 1 66 495 - -
Aed3g2119 500 MobiDBLite consensus disorder prediction 1 20 - -
Aed3g2119 500 PANTHER OS05G0424000 PROTEIN-RELATED 66 495 - -
Aed3g2119 500 Pfam Transmembrane amino acid transporter protein 99 481 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2119 Aed-Chr3 25049994 25054849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2119 126 500 Organic Solute Cotransporters AT2G39890 68.930 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2119 - - gmx:100500168 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2119 3 25049994 25054849 Aed3g2119 3 25049994 25054849 ECH
Aed7g2097 7 23590697 23593710 Aed3g2119 3 25049994 25054849 PCT