Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2115 ATGGATGACGCCGACTTTGGCTTCCCGTCCGAGTTTCCTTACGAGTTTGGCTCGGTTGGGATCGAACCTCTCGACTCTGGTTCGACCGGGACTGAAAGCAGCAGCGACGAGGAGGACTTCTTCGCCGGATTGACTCGCCGGCTGAGTCACGCCTCGCTCAATGAAACAAGGAAGGAACAACAACTCACTGTTTCCATCTGCAACAGTGACAAAACTCAGAGTCAGAAGATGGCTCCTGGTTTGGCCGGGTCACCGCAGTCTATACTGAGCGGAATCGGAAGCTGGTCGGGTCGAAGCGGCGGTTCAGGCGATGGAAGCCCGAACGGTTCTTCTCGTGTTCCGTCGCCGACGACGACGCCGTTTAAGGACGCAAACGACGCGTGGGATGTGTTGTACGCAGCCGCAGGGCAAGTTGCGAGATTGAAGATGAATGACGAAGTCTCTTCGAAGTTCGATTTTCAGAACAGGGGAGTGCTGGGTGGTCTTCCTCCACCTGCTGCGCCGGAGAAGGCGTTTTTTGCAAACCAGGGTGTTTCTCAGGTACGGTACCAACAAGTGAGACCGGAACAGTTACTGAAGCAGCGGTGTGGTTCTGTTTGGGGGAGGCAAGAGGAGCCGGTTAGTTGGGTAACTCAGCCCCAAGTTCAGAACGGGGTTCGCGATTTGCGTGAGTATGGGTATGAACATGAAGCTGTGAATTGCACGCGTGCTTTGCCTCATTCTGCATGGCCCCTTCCTCAAGTGAAACACCAGAATACCCAACAAGTTCCTCGTTTCGGGTCCGGGTCACGAACCGGGTTGCAAGGTGGATCTGCTGGTGGTGTTAGCAAAAGGGGTTGCGCTGGAACAGGGGTTTTCTTGCCTCGTCCTTATGTGGCCCCCCCTCCTCGTCAATATGTGGCCCCTCCTCCGGAATCTCGCAAGAAAACAGGTCGTGCCGCACCAGTCTTGGTCCCAGCCAAGGTTATTCACGCTCTTAACCTCAACATTGATGACTTCAATATCATCGGCGGCGGCCAACCACGCTTCCCAAGTGCTTTCGGTGTGGACTATGATCTGTTAGCGAGGAGAAATGCTCTTCTCTTGCAGCAGAAGTTAAGCTTGCGGCGAGAAGAGGCAGCAAACCATGAAGCTCTTCGCCTCCCTCAGGAATGGACCTACTGA 1164 0.5473 MDDADFGFPSEFPYEFGSVGIEPLDSGSTGTESSSDEEDFFAGLTRRLSHASLNETRKEQQLTVSICNSDKTQSQKMAPGLAGSPQSILSGIGSWSGRSGGSGDGSPNGSSRVPSPTTTPFKDANDAWDVLYAAAGQVARLKMNDEVSSKFDFQNRGVLGGLPPPAAPEKAFFANQGVSQVRYQQVRPEQLLKQRCGSVWGRQEEPVSWVTQPQVQNGVRDLREYGYEHEAVNCTRALPHSAWPLPQVKHQNTQQVPRFGSGSRTGLQGGSAGGVSKRGCAGTGVFLPRPYVAPPPRQYVAPPPESRKKTGRAAPVLVPAKVIHALNLNIDDFNIIGGGQPRFPSAFGVDYDLLARRNALLLQQKLSLRREEAANHEALRLPQEWTY 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2115 387 MobiDBLite consensus disorder prediction 24 38 - -
Aed3g2115 387 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 1 387 - -
Aed3g2115 387 MobiDBLite consensus disorder prediction 1 39 - -
Aed3g2115 387 PANTHER TIP41-LIKE PROTEIN 1 387 - -
Aed3g2115 387 MobiDBLite consensus disorder prediction 70 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2115 Aed-Chr3 25012159 25014860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2115 - - gmx:100816574 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1927 9 22684881 22687767 Aed3g2115 3 25012159 25014860 ECH
Aed3g2115 3 25012159 25014860 Aed3g2115 3 25012159 25014860 ECH
Aed7g2102 7 23634919 23636641 Aed3g2115 3 25012159 25014860 PCT