Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2114 ATGGAGGCTTTATGCAGCAAGGGTGAAAATTTTCAAAAGAAAAAAGATGGGCTTCCTTCTTCTGCTGGTGATTCAACTCACGAAGAAGCCAAAGGGTGTTCTTCTCCTCCTCTTGGTTGGCCTATTCGGAAGGCTACACTTTCCAAATGCCGCAAATCAGATGAGAAGGAAAATGAACCTGTTTCTCCTCACTTGGAAGATTCAAAATTTACCAGCATCACTTCAAAAATGTCAGGAATTGATGCAATGAAGGAAAGGTTTGCAAAATTACTGCTTGGGGAAGATATGTCAGGATCTGGAAAAGGAGTGTGCAGTGCTTTGGCCATCTCAAATGCTATTACTAATCTGTGTGCCACCGTGTTTGGGCAATTGTGGAGACTAGAACCCATAGCTTGTGAAAAGAAAGAAATGTGGCGGAGAGAGATGGAATGGCTTCTCAGTGTTAGTGATCACATTGTTGAGTTAATACCTTCTTGGCAAACATTTCCAGATGGAAGTAAGCTTGAGGTAATGACATGCAGGCCAAGGTCAGATCTTTTCATGAATCTTCCAGCTCTGCGTAAACTTGACAACATGCTTCTTGAAATTTTAGATAGTTGTAAAGATATGGAGTTTTGGTATGTAGACCAAGGAATTGTAGCCCAAGATGCAGATGGATCAGCTTCATTTTGCAAAAGAATTCAACGGCAAGAGGATAAGTGGTGGCTCCCAGTACCTCGTGTACCTCCTTCTGGCCTCAGTGAGAACTCAAGAAAGCAGTTGAATCACACAAGAGAATGTGCAAGCCAAATACTAAAAGCTTCCATGGCTATCAACAACGGTGCTTTAGCTGAAATGGAAGTTCCCGAGTCATACTTGGAAACCCTTCCTAAGAATGGAAGAACTTGCTTGGGGGATTTTATTTACCATTACATGACATCAGAGAAATTCTCTCCAGAGTGCTTGCTTGATTGCTTAGACCTCTCCTCTGAGCACGTAGCACTAGAGATTGCAAACCGTGTGGAAGCCTCAGTATATGTGTGGCGTAGAAGAGCTCACTCTAAACCCCCACCTAATCCTAACCGTTCAACTACCAAGTCATCCTGGGAAATTGTGAAGGACTTCATGGCTGATGGAGATAAGAGAGAACTACTAGCTGAAAGAGCTGAAAATGTTCTACTTTCATTGAAGCAACGCTTCCCAGGGTTAACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCCATACTAGAGAGCTATTCAAGAGTATTGGAGAGCATGGCTTTTAACATTGTGGCTCGCATAGACGATTTGCTATATGTGGATGACTTAACAAAACATTCAGATAGGTTTCCATTGGTTCCAATGACAGTGTCTGTCTCAGGCACTCCTCACAAAGCAATTGGCACACCAAGCTTTTCACCTGCAGCACCGCCACTAATTAGTCCTGCAAGGGGAGAGAGATCTCCTTTCCTCAGAAACAACAACAACATCAAACCTCAACGTCGTGGTTTTGGTGTGAGAAGGGTATTGTCAAATTATCTAGGGGCAGAATCGAAAGAAACAAAGATTTTAAGCAATTCAACTGTGGTGAATGGTGCAAACCCAAGCAGCAATAAAGCAGAACAGCACGAACAACGTCAAAAGAAGTCACATGGCATTGGCAAGACAAAATGA 1677 0.4281 MEALCSKGENFQKKKDGLPSSAGDSTHEEAKGCSSPPLGWPIRKATLSKCRKSDEKENEPVSPHLEDSKFTSITSKMSGIDAMKERFAKLLLGEDMSGSGKGVCSALAISNAITNLCATVFGQLWRLEPIACEKKEMWRREMEWLLSVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFMNLPALRKLDNMLLEILDSCKDMEFWYVDQGIVAQDADGSASFCKRIQRQEDKWWLPVPRVPPSGLSENSRKQLNHTRECASQILKASMAINNGALAEMEVPESYLETLPKNGRTCLGDFIYHYMTSEKFSPECLLDCLDLSSEHVALEIANRVEASVYVWRRRAHSKPPPNPNRSTTKSSWEIVKDFMADGDKRELLAERAENVLLSLKQRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLVPMTVSVSGTPHKAIGTPSFSPAAPPLISPARGERSPFLRNNNNIKPQRRGFGVRRVLSNYLGAESKETKILSNSTVVNGANPSSNKAEQHEQRQKKSHGIGKTK 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2114 558 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 80 446 IPR005512 GO:0005085
Aed3g2114 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 12 529 - -
Aed3g2114 558 ProSiteProfiles PRONE domain profile. 70 452 IPR005512 GO:0005085
Aed3g2114 558 MobiDBLite consensus disorder prediction 1 42 - -
Aed3g2114 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 12 529 IPR038937 GO:0005085
Aed3g2114 558 MobiDBLite consensus disorder prediction 525 558 - -
Aed3g2114 558 Gene3D PRONE domain, subdomain 1 310 451 - -
Aed3g2114 558 Gene3D PRONE domain, subdomain 1 72 309 - -
Aed3g2114 558 MobiDBLite consensus disorder prediction 525 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2114 Aed-Chr3 24996315 24999718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2114 - - gmx:100814278 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2114 3 24996315 24999718 Aed3g2114 3 24996315 24999718 ECH
Aed7g2104 7 23658742 23661453 Aed3g2114 3 24996315 24999718 PCT