Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2003 ATGGCTAAGGCGCGAAGTGTTGGAGTAGCCGTTGACTTTTCTCCTACCAGCAAAATAGCCCTTCGTTGGGCCGTTGACAACCTCATCAACAAAGGTGATCAAATCATCTTGATCAACGTTCAGCCTCCCCAAGCTCATCACACCCGGAAGGACCTTTTTCAAGACACTGCTTTGGTGCCTCTGGAGGAATTGAGGGAGTTGAACTTCACTAAGCAATATGGGATTGCTAAAGATCCTGAGGTCATAGATATCCTTGACACTGCCTCCAAGACTAAAGGGGCAAAGGCAGTGGCAAAGGTGTACTGGGGAGATCCAAGGGAGAAGTTGTGTAACGCTGTGGAAGATCTTCACTTGGACTCTTTGGTTGTTGGAAGCAGGGGATTAGGTCCCATTAAAAGGGTGTTGTTGGGCAGTGTAAGCAAGCATGTGATGACGAATGCTTCTTGCCCCGTCACGGTGGTTAAGGGAAAACAATCTTCCAATTCCCGTCATTAA 495 0.4788 MAKARSVGVAVDFSPTSKIALRWAVDNLINKGDQIILINVQPPQAHHTRKDLFQDTALVPLEELRELNFTKQYGIAKDPEVIDILDTASKTKGAKAVAKVYWGDPREKLCNAVEDLHLDSLVVGSRGLGPIKRVLLGSVSKHVMTNASCPVTVVKGKQSSNSRH 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2003 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 157 - -
Aed3g2003 164 CDD USP_Like 7 154 - -
Aed3g2003 164 PANTHER OS02G0773200 PROTEIN 1 158 - -
Aed3g2003 164 Gene3D HUPs 2 164 IPR014729 -
Aed3g2003 164 PRINTS Universal stress protein signature 115 127 IPR006015 -
Aed3g2003 164 PRINTS Universal stress protein signature 133 155 IPR006015 -
Aed3g2003 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Aed3g2003 164 Pfam Universal stress protein family 5 155 IPR006016 -
Aed3g2003 164 PANTHER IMP2'P 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2003 Aed-Chr3 24115114 24116319 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2003 - - gmx:100500682 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2003 3 24115114 24116319 Aed3g2003 3 24115114 24116319 ECH