Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1999 ATGGCCACCGACACCGAGAAGCTCTCCGCTCTCCAATCCGCCGTCGCCGGATTGAACGAAATCAGTGAGAATGAGAAGAACGGATTCATCAGCCTCGTCAGCCGCTATCTCAGTGGCGAAGCGGAGCATGTGGAATGGAGTAAGATCCAGACGCCTACGGACGAAGTGGTTGTTCCTTACGACTCTTTGGCGCCAACTCCCGATGGTGCTTCGGAGGTGAAGAATCTATTGGACAAGCTTGTGGTGTTGAAGCTAAATGGAGGCTTGGGAACAACTATGGGTTGCACTGGTCCTAAATCTGTAATTGAAGTTCGTGATGGGTTGACATTTCTAGATTTAATTGTCATTCAGATTGAGAATCTCAATTCCAAATATGGAAGCAGTGTTCCTTTACTTTTGATGAATTCATTCAACACTCATGATGACACTCAAAAGATTGTTGAAAAATACCAGAACTCGAATATTGAGATTCATACTTTTAACCAGAGCCAGTATCCTCGATTGGTTGCCGAGGACTTTTTGCCATGGCCTTCCAAAGGCCGCACTGACAAGGATGGGTGGTACCCTCCTGGCCATGGTGATGTCTTCCCATCATTATTGAACAGTGGCAAACTTGATACACTATTGTCACAGGGTAAAGAGTATGTGTTTATTGCCAATTCAGATAACTTGGGAGCTATAGTTGACTTGAAAATCTTAAATCACTTGATCGAGAACAAGAATGAATACTGTATGGAGGTGACTCCCAAAACATTGGCTGATGTAAAGGGTGGCACTTTGATTTCTTATGAAGGAAGGCTCCTGGAAATTGCACAAGTCCCGGATGAACATGTCAATGAGTTCAAGTCAATAGAGAAGTTCAAAATTTTCAACACAAATAATTTGTGGGTGAACTTAAACGCAGTTAAAAGGCTTGTTGAAGCTGATGCTCTTAAGATGGAAATTATTCCCAATCCAAAGGAAGTCGATGGAGTAAAAGTTCTTCAGCTGGAAACTGCAGCTGGTGCTGCAATAAGGTTCTTTGACAAGGCTATTGGGATTAATGGTCCCCGATCACGATTCCTTCCTGTGAAGGCAACTTCAGATTTGCTTCTTGTCCAGTCTGACCTCTACACTTTGGAAGATGGATTTGTCATTCGGAACAAAGCTAGGGCAAATCCTGAAAACCCATCTATTGAACTGGGGCCAGAATTTAAGAAGGTTAGCAACTTCTTGGGTCGCTTCAAGTCAATTCCTAGTATTGTTGAGCTTGACAGTCTAAAAGTGGCTGGGGATGTATGGTTTGGAGCTGGTGTTATCCTCAAGGAAATTAATGGCCCCGAGGACCTGTGA 1332 0.4369 MATDTEKLSALQSAVAGLNEISENEKNGFISLVSRYLSGEAEHVEWSKIQTPTDEVVVPYDSLAPTPDGASEVKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNSKYGSSVPLLLMNSFNTHDDTQKIVEKYQNSNIEIHTFNQSQYPRLVAEDFLPWPSKGRTDKDGWYPPGHGDVFPSLLNSGKLDTLLSQGKEYVFIANSDNLGAIVDLKILNHLIENKNEYCMEVTPKTLADVKGGTLISYEGRLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLNAVKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDKAIGINGPRSRFLPVKATSDLLLVQSDLYTLEDGFVIRNKARANPENPSIELGPEFKKVSNFLGRFKSIPSIVELDSLKVAGDVWFGAGVILKEINGPEDL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1999 443 SUPERFAMILY Nucleotide-diphospho-sugar transferases 15 435 IPR029044 -
Aed3g1999 443 Gene3D Hexapeptide repeat proteins 358 438 - -
Aed3g1999 443 PANTHER - 1 436 IPR016267 GO:0003983|GO:0006011
Aed3g1999 443 PIRSF UDPGP 1 436 IPR016267 GO:0003983|GO:0006011
Aed3g1999 443 Pfam UTP--glucose-1-phosphate uridylyltransferase 27 435 IPR002618 GO:0070569
Aed3g1999 443 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 1 436 - -
Aed3g1999 443 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 357 IPR029044 -
Aed3g1999 443 CDD UGPase_euk 86 373 IPR016267 GO:0003983|GO:0006011
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1999 Aed-Chr3 24060937 24069409 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1999 K00963 - gmx:100785576 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1999 3 24060937 24069409 Aed3g1999 3 24060937 24069409 ECH