Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1993 ATGGCTTCTACACCAGCCTTAAAGCGCACAGACTCTGTGGTAGATAATATGCCTGATGCATTGAGGCAGAGCAGGTACCATATGAAGAGGTGCTTCGGTAAGTACCTTGAAAAGGGTAGAAGGATTATGAAACTTCATCATTTGATGGAAGAAATGGAACTAGTTATAGATGACAAAACCGAAAGAAGTCAAGTTTTGGAGGGCATTCTTGGCTTCATATTGAGCTCCACACAGGAAGCTGTTGTTGATCCACCATATGTTGCCTTTGCAATAAGGCCTAATCCAGGAGTTTGGGAATTTGTAAAAGTGAACTCCGACGACCTTTCTGTTGAGGCTATTACCCCCACAGACTACCTCAAATTCAAGGAAAGGGTACACGATGAAAAATGGGCAACCGATGAGAACTCATTTGAAGCAGACTTTGGAGCATTTGATTTCCAAATTCCTCAGTTAACCCTCTCTTCTTCAATTGGAAATGGACTCCAATTTACTTCCAAGTTCTTAACTTCAAAGTTAACTGGGAAATTGGAGAAAACACAGGCAATAGTGGACTACTTGTTAACACTGAATCACCAGGGAGAAAGCCTGATGATAAATGAAAGCCTGAACTCTGCTGCAAAGCTTCAGATGGCACTTGTAGTGGCTGATGCATTCCTCTCAGGACTTCCCAAAGACACTGCATATCAGAATTTTGAACTAAGGTTTAAGGAGTGGGGGTTTGAGAGAGGATGGGGAGATACATCAGGAAGGGTGAAGGAGACAATGAGAACTCTATCAGAAGTACTCCAAGCACCAGACCCAGTGAACATGGAGAAGTTTTTAAGCAGCTTACCAATAATATTCAATGTTGTCATCTTCTCTGTTCATGGTTATTTTGGACAAGCAGATGTTCTTGGCTTGCCAGACACAGGTGGCCAGGTAGTTTACATATTAGACCAAGTCAAGTCTCTGGAGGCAGAGTTGCTTCTGAGAATCAAGCAACAAGGGCTAAATGTGAAACCTCAAATTCTTGTGGTAACAAGGCTCATTCCTGATGCTCGGGGAACCAAGTGCCACCAAGAGTTGGAACCGATCAGTGATACCAAGCACTCCCATATTCTACGTGTGCCTTTTCAGACAGATAAAGGAATCCTGCGTCAATGGGATGCAACAGCCAAGATTCTGGAGTTCATGGAAGGGAAACCAGATCTTGTTGTTGGAAATTACACTGATGGAAATTTAGTAGCATCACTAATGGCTAGAAAGCTTGGGATAACTCAGGGAACTATAGCACATGCTTTAGAGAAGACTAAGTATGAAGACTCAGATGTCAAGTGGAAAGAGTTGGACCCCAAGTACCACTTCTCATGCCAATTCATGGCTGATACAGTGGCAATGAATGCATCTGATTTCATCATAACCAGCACATACCAGGAAATTGCTGGAAGCAAAGATAGACCTGGACAATATGAAAGCCATACTGCATTCACCCTCCCAGGGCTGTGTAGGGTTGTTTCGGGGATAAACGTGTTTGATCCTAAGTTCAACATAGCCGCGCCAGGAGCCGACCAGTCTGTGTATTTCCCTTACACAGAGAAAGATAAAAGGCTCTCTCAATTTCACCCTGCCATTGAGGACCTTCTCTTTAGTAAAGTGGATAACATTGAGCATATTGGATATCTAGCAGATAGGAGGAAGCCAATCATCTTCTCAATGGCAAGGCTTGATGTTGTGAAGAACTTATCCGGGTTAGTTGAATGGTATGGCAAGAACAAGAGACTGAGAAATTTGGTGAACCTTGTAATAGTAGGGGGCTTCTTTGACCCTTCAAAATCAAAAGATAGGGAGGAAATGGCAGAAATAAAGAAGATGCATGACTTAATTGAAAAGTACCAACTCAAGGGTCAATTTAAATGGATTGCTGCTCAGACGAATAGGTATCGAAATGGAGAGCTATACCGATGCATCGCTGACACAAGGGGAGCTTTTGTGCAGCCTGCTTTGTATGAAGCATTTGGATTAACTGTCATTGAAGCAATGAACTGTGGCTTGCCCACTTTTGCTACCAACCAAGGAGGTCCAGCAGAAATTATTGTCGATGGGGTCTCTGGCTTCCACATTGACCCTCTCAATGGAGATGAATCAAGCAACAAAATTGCTGATTTCTTTGAAAAATGCAAAATGAATCCATCACAATGGAACGCCATTTCTGCGGCTGGATTGCAGCGCATAAACGAATGCTATACCTGGAAGATTTATGCAAACAAGATGGTAAACATGGGGAACATTTACACCTTTTGGAGACAAGTGAATAAGGAGCAAAAGGAGGCAAAGCAGAGATACATTCAGATGTTCTATAATCTTATATTCAAGAATTTGGTTAAGACTGTACATGTTCCTAGTGATGAACCTCAACAACCAGAAGGCAAGCAGACGAGTTTCAAATCGCGTAGCATCACGGGACGTTCACAGTCCAGATTACAAAGGTTATTTGGAAATTAA 2481 0.4252 MASTPALKRTDSVVDNMPDALRQSRYHMKRCFGKYLEKGRRIMKLHHLMEEMELVIDDKTERSQVLEGILGFILSSTQEAVVDPPYVAFAIRPNPGVWEFVKVNSDDLSVEAITPTDYLKFKERVHDEKWATDENSFEADFGAFDFQIPQLTLSSSIGNGLQFTSKFLTSKLTGKLEKTQAIVDYLLTLNHQGESLMINESLNSAAKLQMALVVADAFLSGLPKDTAYQNFELRFKEWGFERGWGDTSGRVKETMRTLSEVLQAPDPVNMEKFLSSLPIIFNVVIFSVHGYFGQADVLGLPDTGGQVVYILDQVKSLEAELLLRIKQQGLNVKPQILVVTRLIPDARGTKCHQELEPISDTKHSHILRVPFQTDKGILRQWDATAKILEFMEGKPDLVVGNYTDGNLVASLMARKLGITQGTIAHALEKTKYEDSDVKWKELDPKYHFSCQFMADTVAMNASDFIITSTYQEIAGSKDRPGQYESHTAFTLPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKDKRLSQFHPAIEDLLFSKVDNIEHIGYLADRRKPIIFSMARLDVVKNLSGLVEWYGKNKRLRNLVNLVIVGGFFDPSKSKDREEMAEIKKMHDLIEKYQLKGQFKWIAAQTNRYRNGELYRCIADTRGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPLNGDESSNKIADFFEKCKMNPSQWNAISAAGLQRINECYTWKIYANKMVNMGNIYTFWRQVNKEQKEAKQRYIQMFYNLIFKNLVKTVHVPSDEPQQPEGKQTSFKSRSITGRSQSRLQRLFGN 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1993 826 Gene3D - 150 279 - -
Aed3g1993 826 Gene3D Glycogen Phosphorylase B; 284 786 - -
Aed3g1993 826 PANTHER SUCROSE SYNTHASE 1 808 - -
Aed3g1993 826 TIGRFAM sucr_synth: sucrose synthase 26 790 IPR012820 GO:0005985|GO:0016157
Aed3g1993 826 MobiDBLite consensus disorder prediction 798 826 - -
Aed3g1993 826 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 300 752 - -
Aed3g1993 826 PANTHER - 1 808 IPR012820 GO:0005985|GO:0016157
Aed3g1993 826 Gene3D - 11 149 - -
Aed3g1993 826 Pfam Glycosyl transferases group 1 554 718 IPR001296 GO:0016757
Aed3g1993 826 MobiDBLite consensus disorder prediction 793 826 - -
Aed3g1993 826 Pfam Sucrose synthase 9 542 IPR000368 GO:0005985|GO:0016157
Aed3g1993 826 Gene3D Glycogen Phosphorylase B; 516 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1993 Aed-Chr3 24022129 24027643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1993 3 796 Glycosyltransferase AT4G02280 55.501 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1993 K00695 - gmx:100808482 1597.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1993 3 24022129 24027643 Aed3g1993 3 24022129 24027643 ECH