Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1976 ATGGTGTGGGGACTCTTCCCTGTTGATCCTCTTTCAGGTGAAGATAAATACTACATTTTCAAAACTGGAGTTTACAAAGTTGGTCGAAAAGGTTGTGATGTGATAATCACTAAAGATAAAGGGGTTTCTCGGGTTCATGCAGAAATAGTTGTTAATACAATGAACCTGGTAAATCCCTTACCAAACAAACATTCTCATTTGTCACCCAGTATACATATTAGAGATTGCTCCAAGTATGGGACATTTATTAGCAAGGATGTTGGGACCAAGAAAAAAGTTCATGAGCTACCAAACAAAGAAACATCATTAGAGGATGATGACCTTGTTTCTTTTGGCACTGGTACTGCTACCTACAAGTTTTGCCATGTACCCCTCGTTTTTTTCATCTGTTCCTCAAATAAAGTGGATCAACCCCTTGAAGAGAAAATTTCATCAATTGGTGCTAGTATTACTCATACCTTAGGTGAAGGGTGCACACATGTGCTGGTGGATCAACTCATGCCATTGAAGAAGGATCTTGTTGATGCTGTTGTGGCAAAAAAATCTTGTGTTCTCAAAAATTGGCTTGAGTTTTTTGCAGAAAAGAACATTAGCACGGAAATTCCTAGCTGTCATTCATATATTCCAACAGTGTCAGTGGAAGGAGAATCAATTAAAATTGCTGACCCCAGAATGCGTGAAGATTGCTTGAGAGGATACACTTTTTTGTTAGAATCTGAGAATTTGTATAAATTTGGGGATCAGCTAAAACCTTTATTGGAAGTGGCTGGTGCAAAAGGTTCAGTTTGTGGAGAGGATAATCGTGTGGTTTGTGTCATCCCAGGAGGACCAGCATGCATGTCTAATCTCTTCAATAAACTAAGTTCTTTGCTTCGAGTGAATGAGATGGATATAATATGTGCTGCTTTCAGTGGACAGTTAGATCTGTCTATTTTGAAATCACCATGCATACTAGTTTCATCATCATGCTCTACAGATGAGACGATTGTAGCAGATTCAGAAACTGAAGTTGAAACAGCCACATCAGCACGCTCAAACAATGCATTCAGCAATGGAAATAATGTAAAATATGAAAAAACAGAAGAATTATATGATGATTCTGACCCTTTGGATAAGAGAAAACATGAGAAAATAGAGGCATCCTCAGATGATGTTTCAACCCGATTCCATGACATTCAACATGCAAAAACAGAAACATCCTTGGATGGTGCTTCTGTCAGATCACATTCTACCAGCTTCAGGAATGATAGTGATGGTATCAAAGTAAAGAAAGACGAGGTTGATGATTATGAAAATGGAAATTCAGATATTATTTACAGCCAAATAGTTGTTCGAGATACAAACATTCATACTAGCATAAGTACTGCACCAAACAGCAGTGTTCCAAATTTTAAACGCTTCAGAAAGGCACAAACTCAATCCGGTAATAGTTTTGACAGTCTTGTTCCCTTTGCAAAGTATCCATACAAGGATTCTGACTGTGGGAATGAGGACGTGACTGAGCTTGTGAAGGAGGAGAAAAGGCGAAAGAAAATGGAAGCTATGGCAGATGACATGCAAGAAAACGAGGCACTGCTGGTTCACGAGGCACTGTTGGTTCTCTTCGTAGCATTCTTACTTCATGAAGAGCTTTGA 1635 0.3878 MVWGLFPVDPLSGEDKYYIFKTGVYKVGRKGCDVIITKDKGVSRVHAEIVVNTMNLVNPLPNKHSHLSPSIHIRDCSKYGTFISKDVGTKKKVHELPNKETSLEDDDLVSFGTGTATYKFCHVPLVFFICSSNKVDQPLEEKISSIGASITHTLGEGCTHVLVDQLMPLKKDLVDAVVAKKSCVLKNWLEFFAEKNISTEIPSCHSYIPTVSVEGESIKIADPRMREDCLRGYTFLLESENLYKFGDQLKPLLEVAGAKGSVCGEDNRVVCVIPGGPACMSNLFNKLSSLLRVNEMDIICAAFSGQLDLSILKSPCILVSSSCSTDETIVADSETEVETATSARSNNAFSNGNNVKYEKTEELYDDSDPLDKRKHEKIEASSDDVSTRFHDIQHAKTETSLDGASVRSHSTSFRNDSDGIKVKKDEVDDYENGNSDIIYSQIVVRDTNIHTSISTAPNSSVPNFKRFRKAQTQSGNSFDSLVPFAKYPYKDSDCGNEDVTELVKEEKRRKKMEAMADDMQENEALLVHEALLVLFVAFLLHEEL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1976 544 Gene3D - 4 122 - -
Aed3g1976 544 SUPERFAMILY SMAD/FHA domain 10 122 IPR008984 GO:0005515
Aed3g1976 544 CDD BRCT 127 190 - -
Aed3g1976 544 Pfam FHA domain 25 112 IPR000253 GO:0005515
Aed3g1976 544 Coils Coil 502 522 - -
Aed3g1976 544 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 84 IPR000253 GO:0005515
Aed3g1976 544 PANTHER NIBRIN-RELATED 2 523 IPR040227 GO:0006302|GO:0007095|GO:0030870
Aed3g1976 544 CDD FHA 2 120 IPR000253 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1976 K10867 - gmx:100783205 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1976 3 23900726 23906460 Aed3g1976 3 23900726 23906460 ECH