LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed3g1974	ATGGGTACATGTTTGAGCAAGAAGAATGGGTCCTCTACCACCTCATCCAACAACAAGCCAGTTTCTCAGCATAGGAATAATTCTGAGAACAGTGTCACTGTCACTTTGTCCAAACCCTCTGAGCCAGAAGTGAGCCTCAAGAAGAAGACACTGCAAGAGAAACAACAATGCCCAGAATCATCAGCACCACAAGATGAAGGTGAAGTGAAGAAAGAGATGTTCATAACCAAACACAGGAAGAGCCATGATGATAGAGACAAAACAACAACAACAGCATCAAAAACCCCACCTTGCATTGCTCCACAACAAGGTGAAGAAGCAATGGTGGTTAACAAGATTGCTGCACCATCCACACCAATGGGAGTGAGGACTTCAAGCTGCAGCAAGGAAGAGGTGGATGCAATTCTGATCCAGTGTGGAAGGCTAAGCAGAAGCTCTTCTGGGAGAAAGTACTCTGGCTCCAAGAGAAGTTTTGATTTTGATCACTGTGACAATGACACAACAACTTCTGCTGAGGATGACCAAAGAAAGGCCAAAGGCTATGGTAGGGAGGAAAATGATGTGGGGGCGGCTTCTGAGAGCCGCCGCCACCGCCAGTCCCCGAGGCGGTCTCAGGGAAGGAGAAGGACTCCTAGTAGGGAAAGAGACCAATCCAATGGCAGAGAAAGGAGAGTGAGTAGATCTCCTGGTAGAAGATCTTCTGACACCACAACTACTGCAAATGCAAACAGTAACAACAACAGCAACAGCAACAACAACAGCACAAGTTCTAGGCCTGGGAAAATGGTGTCTGTTCCAGCCACTGTTTCATCTTTGGTTATGGATAAAAGTAACAACAACTGTGGTGGAGAATCTGGGACCAAGAGGATCATTGTTAAGAGAAATGTTGGTGCTGCATCACCACGTGCTCAATCTCCTGCTAGAGTAAAATCTCCTGCTAGAGTTGTTAATGGGAATGTGGGAAGGGATAAAGTGTTGAGTGAGAATCAGCAACAACCTTCTCTTAGCCGTAACAACTCTTCAAGGAAAGCAGAACAATCTCCTTACAGAAGAAACCCTCTTGGTGAGGTGGATCATAACTCTTCAAGGAAAGCTGAACATTCTCCTTACAGAAGAAACCCTCTCAGTGAGGTTGATGCTAACAGCAAGGTGCAACAAAACAAGCCCAAGATTGAAGCAGAAACCAAACAGAAACCAAATAGTAGAGTTGCATTGGAGAAGGGTGTGAGTGTGAATTGCAAGACAAAGGAGCAACATGAGGAAGAGCCATCAGTGCTTGTTAATGCTGTTGTGAAGACAACAGTGGTGTCATCAGGAGTTGACAACCTTAAACCCCAAGGCTTAACAAGAAGCAGATCTTCTAGAAGATCTAGAGACTTAGACACCAATCCTGAAGCTGTGGTGAATCCTAGCAACTCCTATGCATCCCTTCTGCTTGAGGACATTCAGAACTTCCATCAAAAGAACACACCACCACCACAACAACAACAACATTCTTCTATTTCTCTCCCAGCATGTCTCACCAAGGCTTGTTCCATCCTTGAAGCTGTTGCTGATCTCAACTCCACCACAAGCTCAAATTTCCCTGAGGACAAGAGGAGTAGTACTCCATCCACTCAACAATCCATTAGGAATGAGTACTATGGGAAGAGAGTGGCAGGTGCCACAAAGGAGGAACCTTTTATGGAATCTGAGGTAGCTGTTAGTGATGATGTGATGGAACCAAGCTTGCACAAGTATGTGACAGTGAAGAGAGGTGGTGAGGTAGTAGTAGAAGACATGATGGAGGACCAAGAGTCTTCAGGAAGCAACAGCTTCAGTGTGAGTTGTAGCAGTGGCCAACAACACATTTCTTGTTCCTCATGGGAGCCAAATTCTGCTGACTCAACAGATTGTTGGACTTCGAGAGAGGAGGATCAGAAAACACCCTTAGGATTGGGATTGGGATGTAGTTTGTCATCATCTGAAGCCAAGAAGAAGAAGAATGATTTGAACAGAAAAAAGAGAGAGTGTGATCATGAACACAGCACTGGCATTGGCCGTGGAAGACTTGGTTCCAATAAAGGTGTGTGTGTTGTGTGA	2082	0.4534	MGTCLSKKNGSSTTSSNNKPVSQHRNNSENSVTVTLSKPSEPEVSLKKKTLQEKQQCPESSAPQDEGEVKKEMFITKHRKSHDDRDKTTTTASKTPPCIAPQQGEEAMVVNKIAAPSTPMGVRTSSCSKEEVDAILIQCGRLSRSSSGRKYSGSKRSFDFDHCDNDTTTSAEDDQRKAKGYGREENDVGAASESRRHRQSPRRSQGRRRTPSRERDQSNGRERRVSRSPGRRSSDTTTTANANSNNNSNSNNNSTSSRPGKMVSVPATVSSLVMDKSNNNCGGESGTKRIIVKRNVGAASPRAQSPARVKSPARVVNGNVGRDKVLSENQQQPSLSRNNSSRKAEQSPYRRNPLGEVDHNSSRKAEHSPYRRNPLSEVDANSKVQQNKPKIEAETKQKPNSRVALEKGVSVNCKTKEQHEEEPSVLVNAVVKTTVVSSGVDNLKPQGLTRSRSSRRSRDLDTNPEAVVNPSNSYASLLLEDIQNFHQKNTPPPQQQQHSSISLPACLTKACSILEAVADLNSTTSSNFPEDKRSSTPSTQQSIRNEYYGKRVAGATKEEPFMESEVAVSDDVMEPSLHKYVTVKRGGEVVVEDMMEDQESSGSNSFSVSCSSGQQHISCSSWEPNSADSTDCWTSREEDQKTPLGLGLGCSLSSSEAKKKKNDLNRKKRECDHEHSTGIGRGRLGSNKGVCVV	693

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	1	40	-	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	654	679	-	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	438	469	-	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	64	90	-	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	1	106	-	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	231	285	-	-
	Aed3g1974	693	PANTHER	OS02G0734667 PROTEIN	1	361	IPR040412	-
	Aed3g1974	693	PANTHER	OS02G0734667 PROTEIN	360	691	IPR040412	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	356	373	-	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	154	199	-	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	323	347	-	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	137	408	-	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	656	679	-	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	523	546	-	-
	Aed3g1974	693	MobiDBLite	consensus disorder prediction	207	230	-	-
	Aed3g1974	693	PANTHER	OS02G0734667 PROTEIN	1	361	-	-
	Aed3g1974	693	PANTHER	OS02G0734667 PROTEIN	360	691	-	-
	Aed3g1974	693	Coils	Coil	654	674	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed3g1974	Aed-Chr3	23892251	23895150	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed3g1974	-		-	gmx:100805280	909.442

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed3g1974	3	23892251	23895150	Aed3g1974	3	23892251	23895150	ECH
	Aed4g2117	4	24128396	24130691	Aed3g1974	3	23892251	23895150	PCT