Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1766 ATGGGTACCGGTTGGAGAAGAGCCTTTTGCACTAGCGACCCAGAATCCTCAATACACTCCAAACACAGATCCCAAACTCCTTCTCCTTCACCAAGAACCTGCGCCAGACTCCGCTTTCTCTCCACACACCATCATCAACCTCTTTCTTCTTCACAAACAATTTCAGAACTACCACCACCTAATGACAGCCCCAGATTTCAAACCAAAGCCAACAAGTCAAACCCAAATTCTCCCCTCTCCCCTAAGCTCAACCTCTCCCTCTTCAGAAACACCTTCAAATTCAGAAATAATTGCGGAATCTGTTCGAATAGCGTGAAGACAGGGCAGGGAACGGCCATTTACACTGCCGAGTGCGGTCACGCGTTTCACTTCCCCTGCGTCGTTTCCCATGCACGCCGCACCCACGTCTGCCCCGTATGCCACGCCACGTGGAACGACGTGCCGCTTCAACAAAACGACGCCGTCCAAACCGAGAAACAAAAACACTCCGATTCCGTCACCTCCTACGACGACGACGAGCCTCTCCCTTCTCCTCTATCATGCTCCACGCAAATAGTTCCGATCCCCGAAGCCGACGAAAACACCGAAGATGAAGAACAAAACGACGACGTATCCGAGTTTCCTGGCTTTTTCGTCGATCCGAAGCCGCCTCAATCCTCGTTGCGACAAAACAACGCTTATTCGAGGAGCGTAAGAGTGAAGCTGATGCCGGAGTGTGCCGTCATATCAGTTTCGCAAAGCCACGAAACTCGTGCTTTGGTGTTAAGAGTGAAGGCTCCACCGCCTCCGTCGCCGCCGCGACGGAGGCGGCCTCAGATGGATCTCGTGACGGTGCTTGACGTTAGCGACAGCATGAACGGCGCGAAGCTTCACATGCTAAAGCGCGCTATGCGTTTGGTTATATCATCTCTCGGAGCGGCTGACCGGCTCGCCGTCGTGGCTAATTCCAAACGGTTGTTATCTCTAAGAAGAATGACGGCTCAGGGACAACGAGCGGCTCGACGCGTCGTGGATAAGCTCGTGTGTGGCCATGGGAACAGCGTTGGTGAAGAAGTTATGAAGATAGCCGCGAAGGTTCTCGAAGATCGGAGAGAGATAAACCCTCTCGCTAGGATTGTGCTCTTATCAGACGGTCACGACAACATCAACAGAAAAAATCAACGGAGATGCTTAAGCCACGTGCCTTCCACCCGGTTCGATTGTATCCAAGTTCCGGTTCATTCGCATGGCTTCGAGACGAAAAAAGCCGCTTTATTAAACGAACCGTTAGAGGATGATTTTGCACTATATGTTAACAGGACGTTGAGTGTGGCGGTACATGATTTGAGAATTCAGCTTGGCTTCTCTGCGCCAGCTGAAATACGAGCCGTTTATTCATGCAGTGGGGGACCCACTGCGCTGAGCACAAGCGCGGCTCGGCTTGGTGATTTATACGCTGAAGAAGAGAAGGAGTTGTTGGTGGAAGTTAGAGTGCCCACGTCAGCATTGAGGATCCACCACGTGATGACAGTGCGGTGTGTTAACAAAGACCCTGCAGCATCTCAAGGGTTTGTGTACGGTGCGGAACACGCGCTTACGGTGGTGCCACCAAAGAGTGCTTCAGTTTGTGGCGGCAGGGTGGAGCGGCTGAGGAATGTATTTATAACGAGCCGAGCCGTAGCCGAGTCAAGAGAGCTTGCCAAGCACAACGAGTTTTCCAGTGCTAGTCATTTGCTCGATTCGGCTAGGGCACTTCTGGCTAGGTTTGGCTCGACTGAGGAGTACATGCGCGGCTTGGAAGCCGAGCTTGCGGAGCTTGAGTGGCGAAAGCAGCAACAGGTTGAGAGGGAGATGAAGTTGGTGGATGAGAATGGTGGTGAGGTTTTAACGCCGACATCGGCTTGGAGAGCCGCTGAGAAGCTGGCTAAGATGGCTAGGATGAAGAAATCGTTGAACAAAGTTAGCGACTTGCACGGCTTCGAGAATGCTAGGTTTTAA 1977 0.5225 MGTGWRRAFCTSDPESSIHSKHRSQTPSPSPRTCARLRFLSTHHHQPLSSSQTISELPPPNDSPRFQTKANKSNPNSPLSPKLNLSLFRNTFKFRNNCGICSNSVKTGQGTAIYTAECGHAFHFPCVVSHARRTHVCPVCHATWNDVPLQQNDAVQTEKQKHSDSVTSYDDDEPLPSPLSCSTQIVPIPEADENTEDEEQNDDVSEFPGFFVDPKPPQSSLRQNNAYSRSVRVKLMPECAVISVSQSHETRALVLRVKAPPPPSPPRRRRPQMDLVTVLDVSDSMNGAKLHMLKRAMRLVISSLGAADRLAVVANSKRLLSLRRMTAQGQRAARRVVDKLVCGHGNSVGEEVMKIAAKVLEDRREINPLARIVLLSDGHDNINRKNQRRCLSHVPSTRFDCIQVPVHSHGFETKKAALLNEPLEDDFALYVNRTLSVAVHDLRIQLGFSAPAEIRAVYSCSGGPTALSTSAARLGDLYAEEEKELLVEVRVPTSALRIHHVMTVRCVNKDPAASQGFVYGAEHALTVVPPKSASVCGGRVERLRNVFITSRAVAESRELAKHNEFSSASHLLDSARALLARFGSTEEYMRGLEAELAELEWRKQQQVEREMKLVDENGGEVLTPTSAWRAAEKLAKMARMKKSLNKVSDLHGFENARF 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1766 658 SMART ring_2 98 140 IPR001841 -
Aed3g1766 658 ProSiteProfiles Zinc finger RING-type profile. 98 141 IPR001841 -
Aed3g1766 658 Gene3D von Willebrand factor, type A domain 273 426 IPR036465 -
Aed3g1766 658 ProSiteProfiles VWFA domain profile. 274 381 IPR002035 -
Aed3g1766 658 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 658 - -
Aed3g1766 658 MobiDBLite consensus disorder prediction 45 82 - -
Aed3g1766 658 Coils Coil 589 609 - -
Aed3g1766 658 Pfam RING-like zinc finger 97 127 IPR001841 -
Aed3g1766 658 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 158 IPR013083 -
Aed3g1766 658 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 3 658 - -
Aed3g1766 658 MobiDBLite consensus disorder prediction 154 180 - -
Aed3g1766 658 SUPERFAMILY RING/U-box 91 148 - -
Aed3g1766 658 Pfam von Willebrand factor type A domain 275 379 IPR002035 -
Aed3g1766 658 SMART VWA_4 272 435 IPR002035 -
Aed3g1766 658 SUPERFAMILY vWA-like 270 393 IPR036465 -
Aed3g1766 658 MobiDBLite consensus disorder prediction 11 33 - -
Aed3g1766 658 CDD RING-H2 98 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1766 Aed-Chr3 22279873 22282301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1766 - - gmx:100795015 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1766 3 22279873 22282301 Aed3g1766 3 22279873 22282301 ECH