Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1747 ATGGCGACGTTCGAACTGTACCGCAGGTCGACGATCGGAATGTGCCTGACGGAGACGTTGGACGAGATGGTTCAGAATGGCACTCTCAGCCCTGAGCTCGCGATTCAGGTTCTTGTCCAGTTTGATAAGTCCATGACTGAGGCTCTGGAAACGCAAGTTAAGAGCAAGGTCTCCATCAAGATGCCTGGTTGGAAGAGTTTTGATTTGTTTCTCCTGGGACATCTCCATACATATAGATTTTGTGACAATGTTTGGACCTTCATCTTGCAAGATGCTCTCTTCAAGAATGAAGACAGCCAAGAGAACGTAGGAAGGGTTAAAATAGTGGCGTGTGACTCGAAGTTGCTCACACAATAA 357 0.4706 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIKMPGWKSFDLFLLGHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1747 118 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 1 118 - -
Aed3g1747 118 Gene3D - 3 54 IPR009083 GO:0005672|GO:0006367
Aed3g1747 118 Pfam Transcription initiation factor IIA, gamma subunit, helical domain 4 49 IPR015872 GO:0005672|GO:0006367
Aed3g1747 118 Gene3D - 69 117 IPR009088 GO:0005672|GO:0006367
Aed3g1747 118 CDD TFIIA_gamma_N 4 51 IPR015872 GO:0005672|GO:0006367
Aed3g1747 118 SUPERFAMILY Transcription factor IIA (TFIIA), beta-barrel domain 69 114 IPR009088 GO:0005672|GO:0006367
Aed3g1747 118 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 1 118 IPR003194 GO:0005672|GO:0006367
Aed3g1747 118 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 4 54 - -
Aed3g1747 118 PIRSF TFIIA_gamma_hum 1 118 IPR003194 GO:0005672|GO:0006367
Aed3g1747 118 Pfam Transcription initiation factor IIA, gamma subunit 73 113 IPR015871 GO:0005672|GO:0006367
Aed3g1747 118 CDD TFIIA_gamma_C 73 114 IPR015871 GO:0005672|GO:0006367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1747 K03123 - gmx:100814623 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1747 3 22092344 22097759 Aed3g1747 3 22092344 22097759 ECH