Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1744 ATGGGTTTGGATAAAGCAATTTACATTGTTTTAACCAAATCATTCACCTTCCTTGCCTGGCCTCCGTTTAGTTTGCTTTGTCCATTGTTTGTTTCTGTTCGGGCAATGGAGAGTGATTCCCAGTCCAGCAACCAGCGATGTCTTGTTTTTTGGGTTCTGTTTTCCTTGTGTATGATCATGGAAGGGGAACTTTCAGTGTTATTTGAAGGCCTCCCATGGTGGCCTCATGTGAAATCCATAGCAACAATCTTGTTGTTGATACCTTATATTGATGCAGCACCATATGTCTATAAATTCTTAACTAGACACTACTGTGCTTGGAGCCTACTCACAGGGTCAACATCAAACATCTTCAGTGAGAAAAGTGCACATTTGGAATCAGATGAGGATAGTAAACTTGTTGATGTCTCTGATCACACAATTACGACAAGCCAAATGCAAGAAAAGAAACTTGAATCATATCAGGTATTGATGAGTTTTTCCCCTAGTATTTTCATGCCATTACAGAAAATTACTGACAACTTCAAGGAGAAGAGCACACATGTGGAATCAGATGTGAATAGTAAACTTGTCGATGTCTCTGATCAGACAATTACATCAAATCAAGTACAAGAAAAGAAACATGAAGCATATCAGGAGATAGATGATGATATTGCTGGTTGTGACAAGACAGAAAGCAGTAACACAATGCTAACTAGTAAAAATCTAGCCCAAAAGGAATGGAACTGTGCTTTATGTCAGATTAGTACTACAAGTAAAAATTGCTTAAAGGCACATCTTAAAGGGAAGAAACACAATGATAGGGAAAAAGAGCTTAGAGTTGAGTTACATCATATTACTCAGAAAAGAATCAAAGGGATGTTACTCAACCAAATTGCAAACATTCTCAAACCAGATTCCAGATCCAAAAGATGGTGTGAATGGACAAAGCCAGAGGTTGGATGGACAAAGTTAAACACCGATGGTTCGATTCATAAAGACACTGCTAGCTTTGGCGGGCTGCTTCGCGACTATAAGGGCATACCGATATGTGCATTTGTCTCTAAAGCTCCTCAAGGAGATGTTTTCTTGGCTGAGCTGTGGGGTATTTGGAGAGGCCTTGTTCTTTCCTTGGGACTTGGGATTAAGGCAATATGGGTGGAATCAGACTCCATGAGTGTTGTGAAGACGGTTAATAAGAAGCAGTTTTGTCCAAAAGCTGTTGGCTATTTGAAACAAATCTGGAAACTTTTAAAGAAGTTTGATAAATATCAAATTTCTCACTCATGGCGGGAAACTAACAGAGCAGCAGATCATCTTGCTAAGATGGATCTTTGGGCAAACGATGTGGTTTTGTGGCCGGTTGATTTCCCACCTAGCCTTTGCAGTATCATTAAAGACGATGCCAAAGGAACAAAATATCTTCGACGATGA 1413 0.3963 MGLDKAIYIVLTKSFTFLAWPPFSLLCPLFVSVRAMESDSQSSNQRCLVFWVLFSLCMIMEGELSVLFEGLPWWPHVKSIATILLLIPYIDAAPYVYKFLTRHYCAWSLLTGSTSNIFSEKSAHLESDEDSKLVDVSDHTITTSQMQEKKLESYQVLMSFSPSIFMPLQKITDNFKEKSTHVESDVNSKLVDVSDQTITSNQVQEKKHEAYQEIDDDIAGCDKTESSNTMLTSKNLAQKEWNCALCQISTTSKNCLKAHLKGKKHNDREKELRVELHHITQKRIKGMLLNQIANILKPDSRSKRWCEWTKPEVGWTKLNTDGSIHKDTASFGGLLRDYKGIPICAFVSKAPQGDVFLAELWGIWRGLVLSLGLGIKAIWVESDSMSVVKTVNKKQFCPKAVGYLKQIWKLLKKFDKYQISHSWRETNRAADHLAKMDLWANDVVLWPVDFPPSLCSIIKDDAKGTKYLRR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1744 470 SMART ZnF_U1_5 238 272 IPR003604 GO:0003676|GO:0008270
Aed3g1744 470 CDD RNase_H_like 318 435 IPR044730 -
Aed3g1744 470 Pfam Zinc-finger of C2H2 type 241 265 - -
Aed3g1744 470 PANTHER HVA22-LIKE PROTEINS 10 470 IPR004345 -
Aed3g1744 470 Gene3D Classic Zinc Finger 225 277 - -
Aed3g1744 470 Pfam Reverse transcriptase-like 319 436 IPR002156 GO:0003676|GO:0004523
Aed3g1744 470 Gene3D - 315 438 IPR036397 GO:0003676
Aed3g1744 470 PANTHER PROTEIN A, PUTATIVE ISOFORM 1-RELATED 10 470 - -
Aed3g1744 470 SUPERFAMILY beta-beta-alpha zinc fingers 225 274 IPR036236 -
Aed3g1744 470 Pfam TB2/DP1, HVA22 family 28 103 IPR004345 -
Aed3g1744 470 SUPERFAMILY Ribonuclease H-like 315 439 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1744 - - gmx:102661917 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1744 3 22069157 22073247 Aed3g1744 3 22069157 22073247 ECH