Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1735 ATGGCTTCGAATTCCGAGCTGGCGCGCACCGTTGTTGAGTCGGCGCTGGGCGTTTCGATTTCGGATTCGGTGCTGGTGATCGTGGCCACTTCCGTGGCTTTGGTGATCGGGCTTCTAGTGTTCGTGTGGAGAAAATCTGCGGATTGGAGCCAGGACCAGAAGCCGCTCGCGGTGCCGAAGCTGCTGGTGAAGGAAGAAGAAGAAGATGAAGTTGGCGCTAGTTCGGGGAAGACTAGAGTTGCTATTTTCTTCGGAACTCAAACTGGCACCGCTGAGAGCTTTGCCAAGGATGACTATGCAATGGATGATGATCAATATGAAGAGAAGCTGAAGAAAGAGTCACTTGCATTTTTCATGTTGGCAACATATGGAGATGGAGAGCCAACTGACAATGCTGCAGGGTTCTACAAATGGTTTACTGAGGGTAAAGATGAGAGGGGTAGCTGGCTTCAACAGCTCATGTATGGCATTTTTGGCTTAGGTAACCGGCAATATGAACATTTTAATAAGATAGGTATAATAGTTGATGAAGAACTTGTTGAACAAGGTGCAAAGCATCTTGTTCCATTGGGGCTAGGTGATGACGATGAATCCATTGAAGTTGATTTTGTTGCTTGGAAGGAGTCTCTATGGCCTGAGTTGGATCAGTTGCTCCGAGATGAGAATAATCACTTAAATGTGGCAAATGGTAATGCTGTGTTTGATATTCAACATCCTTGCAGATATGAAACTGGTGACCATGTGGGTGTTTTTGCTGAAAACGGTGTTGAAACTGTTGAAGAAACTGGAAACTTGCTGGGTCAGGATTTAGATTTGGTATTTTCCCTTCACACTGATAATGAGGATGGTACTCCTGTAGGAGGTTCTCTGCCACCTCCTTTTCCTGGCCCTTGCACACTGCGCTTTGCTTTGGCACATTATGCAGATCTCTTGAACCCCCCACGCAAGGCTGCTTTAGTGGCTCTGGCTGCACATACTTCGGAACCCAGTGAAGCAGATAGATTAACGTTCCTCTCATCTCCTCAGGGGAAGGTTGAAAAATTTGCCAAGAGTTATACTGTTTCTGTTTTCAAGTTGAGACTTTTCTATCTTTTCATCTTTCTCCCATCAGCAAAACCACCGCTTGGTGTTTTTTTTGCTGCAGTTGCCCTTCACTTACAACCTCGTTATTATTCTATTTCATCCTCGCCTAGGTTTTCCCTGCAAAAGGTACATGTTACTTGTGCCTTGGTGTGTGGTCCAACTCCTACTGGAAGAATTCACAAAGGAGTATGTTCAACCTGGATGAAGAATGCCATTCCCTTAGAGAAAAGTCATGACTGTAGTTGGGCTTCTATTTTTATCAGAACATCAAACTTCAAGTTACCAGCTGATCATTCCATTCCTATGATTATGGTTGGTCCTGGTACAGGCTTGGCACCTTTCAGGGGATTTTTACAGGAAAGATTGGCCCTCGGAGAGGATGGTGTTCAACTTGGTCCTGCATTACTCTTCTTTGGATGTAGAAATCGACAAATGGATTTTATTTATGAGGATGAGCTAAAGAATTTTTTGGAACAAGGTGCTCTATCAGAGTTGATAGTCGCATTCTCGAGAGAGGGATCTGAAAAGGAGTATGTTCAACACAAGATGATGGATAAAGCAGCAAATCTGTGGAATTTGATTTCTCAGGGAGGGTATCTTTATGTCTGTGGTGATGCTAAGGGTATGGCCAGGGACGAAAATGTGGACTCTTCAAAGGCAGAGGCTATAGTAAAAAAACTCCATATGGATGGACGTTATCTTAGAGATGTCTGGTAA 1800 0.4428 MASNSELARTVVESALGVSISDSVLVIVATSVALVIGLLVFVWRKSADWSQDQKPLAVPKLLVKEEEEDEVGASSGKTRVAIFFGTQTGTAESFAKDDYAMDDDQYEEKLKKESLAFFMLATYGDGEPTDNAAGFYKWFTEGKDERGSWLQQLMYGIFGLGNRQYEHFNKIGIIVDEELVEQGAKHLVPLGLGDDDESIEVDFVAWKESLWPELDQLLRDENNHLNVANGNAVFDIQHPCRYETGDHVGVFAENGVETVEETGNLLGQDLDLVFSLHTDNEDGTPVGGSLPPPFPGPCTLRFALAHYADLLNPPRKAALVALAAHTSEPSEADRLTFLSSPQGKVEKFAKSYTVSVFKLRLFYLFIFLPSAKPPLGVFFAAVALHLQPRYYSISSSPRFSLQKVHVTCALVCGPTPTGRIHKGVCSTWMKNAIPLEKSHDCSWASIFIRTSNFKLPADHSIPMIMVGPGTGLAPFRGFLQERLALGEDGVQLGPALLFFGCRNRQMDFIYEDELKNFLEQGALSELIVAFSREGSEKEYVQHKMMDKAANLWNLISQGGYLYVCGDAKGMARDENVDSSKAEAIVKKLHMDGRYLRDVW 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1735 599 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 493 502 IPR001709 GO:0016491
Aed3g1735 599 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 537 553 IPR001709 GO:0016491
Aed3g1735 599 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 242 252 IPR001709 GO:0016491
Aed3g1735 599 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 464 483 IPR001709 GO:0016491
Aed3g1735 599 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 423 432 IPR001709 GO:0016491
Aed3g1735 599 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 506 517 IPR001709 GO:0016491
Aed3g1735 599 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 560 568 IPR001709 GO:0016491
Aed3g1735 599 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 389 396 IPR001709 GO:0016491
Aed3g1735 599 Gene3D - 455 599 IPR039261 -
Aed3g1735 599 Gene3D - 62 229 IPR029039 -
Aed3g1735 599 ProSiteProfiles Flavodoxin-like domain profile. 80 211 IPR008254 GO:0010181
Aed3g1735 599 SUPERFAMILY Riboflavin synthase domain-like 234 453 IPR017938 -
Aed3g1735 599 Pfam Oxidoreductase NAD-binding domain 465 573 IPR001433 GO:0016491
Aed3g1735 599 Pfam Flavodoxin 82 206 IPR008254 GO:0010181
Aed3g1735 599 PANTHER NADPH--CYTOCHROME P450 REDUCTASE 240 599 - -
Aed3g1735 599 PANTHER NADPH--CYTOCHROME P450 REDUCTASE 8 233 - -
Aed3g1735 599 PANTHER NITRIC OXIDE SYNTHASE-RELATED 240 599 - -
Aed3g1735 599 PANTHER NITRIC OXIDE SYNTHASE-RELATED 8 233 - -
Aed3g1735 599 Gene3D Translation factors 234 454 - -
Aed3g1735 599 Pfam FAD binding domain 240 428 IPR003097 GO:0016491
Aed3g1735 599 Gene3D - 252 387 IPR023173 GO:0016491
Aed3g1735 599 PRINTS Flavodoxin signature 81 94 IPR001094 GO:0010181
Aed3g1735 599 PRINTS Flavodoxin signature 152 162 IPR001094 GO:0010181
Aed3g1735 599 PRINTS Flavodoxin signature 176 195 IPR001094 GO:0010181
Aed3g1735 599 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 212 456 IPR017927 GO:0016491
Aed3g1735 599 SUPERFAMILY Flavoproteins 77 218 IPR029039 -
Aed3g1735 599 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 452 599 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1735 Aed-Chr3 21966728 21973381 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1735 K00327 - gmx:547712 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1735 3 21966728 21973381 Aed3g1735 3 21966728 21973381 ECH
Aed3g1735 3 21966728 21973381 Aed10g0149 10 1125790 1133116 PCT