Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1717 ATGGCCTCAATCTCAGGCATTTGCTCATCCTCCCCAACTCTGAATCACTCCACCCCTAAACGACGCCGCAGCACACCACTCCTCCCCTCATTACCATTCCCCAACAAACTCTCCCCGCCACGTTCCCTCGCGCGTGAGGCTCCCGCAGTAACGAAACCGGTACACGCGGGGCTCGAGAAGAACCCACGCGCGCTGTGGCACCGTTACGTGGAGTGGCTCTACCAGCACAAGGAGCTCGGCCTCTACCTCGACGTCAGCCGGGTCGGGTTCTCCGACGAGTTCGTCCTCGAAATGGAGCCCCGCTTCCAGGCGGCGCTCCTCGCAATGGAGAAGCTCGAAAAGGGCGCTATCGCGAACCCCGACGAGGGCCGCATGGTCGGACACTATTGGCTCAGGGACTCCACGCGCGCCCCCAACTCTTTCCTCAAGGCGCAGATTGACAAAACGCTCGACGCCATTTGTACCTTCGCCAACGACGTCGTCACCGGTAAGATTAAGCCGCCGTCGTCTCCGGGGAGGTTTACGCAGATACTTTCGGTTGGGATTGGAGGATCCGCGCTTGGACCGCAGTTTGTGGCAGAGGCGCTGTCTCCGGATAATCCTCCACTCAAGATAAGATTTATTGACAACACGGATCCTGCTGGAATAGATCACCAGATTGCACAACTTGGGCCTGAGCTAGCTTCAACACTTGTGATAGTAATTTCGAAGAGTGGAGGTACCCCTGAGACTAGAAATGGCTTATTGGAAGTGCAGAAAGCCTTTCGTGAAGCTGGATTGAATTTCCCAAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAACACTGCAAGAATTGAGGGCTGGTTAGCTAGATTCCCCATGTTTGACTGGGTGGGAGGTAGAACATCAGAGATGTCTGCAGTTGGCCTGCTTCCAGCAGCCCTTCAGAGCATTGACATCAGAGAAATGCTTGCCGGTGCAGCATTAATGGATGAGGCAAATAGGAGTACTGTGATAAGGAAAAATCCTGCCGCTTTGCTGGCTTTATGTTGGTATTGGGCTACAGATGGTGTTGGATCAAAAGATATGGTTATCCTTCCGTATAAGGACAGCTTGCTATTGTTTAGTAGATACTTGCAGCAGTTGGTCATGGAATCTCTAGGCAAGGAGTTTGACTTGGATGGTAATCGGGTTAATCAAGGACTTAGTGTCTATGGAAATAAAGGAAGCACAGATCAGCATGCCTACATTCAGCAACTGAGGGAAGGTGTGCACAATTTTTTTGCGACATTCATTGAGGTGCTACGCGATAGACCACCTGGTCATGATTGGGAGCTCGAACCAGGTGTCACATGTGGCGACTACCTGTTTGGTATGCTACAGGGAACAAGATCAGCCCTTTATGCCAATAACCGTGAATCTGTTACAGTCACAGTGCAAGAAGTGACACCAAGATCAGTTGGTGCCCTTATAGCCCTTTATGAACGGGCTGTTGGAATATATGCCTCACTTGTTAATATAAATGCTTATCACCAACCTGGTGTGGAAGCTGGTAAGAAAGCTGCAGGAGAAGTGTTAGCCCTTCAGAAGCGGGTATTGGCAGTGCTAAATGAAGCAAGCTGCAAGGAGCCTGTGGAGCCATTAACGCTTGAAGAAGTAGCTGACCGTTGCCATGCCCCAGAAGATATTGAAATGATTTACAAGATCATTGCTCATATGGCTGCCAATGACAGAGCACTAATTGCTGAAGGTAACTGTGGTTCTCCGAGGAGCATCAAGGTTTTTCTTGGGGAGTGTAATCTTGATGAACTGTACGCTTGA 1812 0.5022 MASISGICSSSPTLNHSTPKRRRSTPLLPSLPFPNKLSPPRSLAREAPAVTKPVHAGLEKNPRALWHRYVEWLYQHKELGLYLDVSRVGFSDEFVLEMEPRFQAALLAMEKLEKGAIANPDEGRMVGHYWLRDSTRAPNSFLKAQIDKTLDAICTFANDVVTGKIKPPSSPGRFTQILSVGIGGSALGPQFVAEALSPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLNFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQSIDIREMLAGAALMDEANRSTVIRKNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGLSVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESVTVTVQEVTPRSVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTLEEVADRCHAPEDIEMIYKIIAHMAANDRALIAEGNCGSPRSIKVFLGECNLDELYA 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1717 603 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 603 - -
Aed3g1717 603 Gene3D - 59 170 - -
Aed3g1717 603 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 31 532 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 SUPERFAMILY SIS domain 64 526 IPR046348 GO:0097367|GO:1901135
Aed3g1717 603 PRINTS Glucose-6-phosphate isomerase signature 365 386 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 PRINTS Glucose-6-phosphate isomerase signature 499 512 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 PRINTS Glucose-6-phosphate isomerase signature 467 485 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 PRINTS Glucose-6-phosphate isomerase signature 177 196 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 PRINTS Glucose-6-phosphate isomerase signature 485 499 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 PRINTS Glucose-6-phosphate isomerase signature 289 307 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 Gene3D - 309 508 - -
Aed3g1717 603 Gene3D - 171 308 - -
Aed3g1717 603 Pfam Phosphoglucose isomerase 464 524 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 Pfam Phosphoglucose isomerase 109 433 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 MobiDBLite consensus disorder prediction 1 24 - -
Aed3g1717 603 ProSitePatterns Phosphoglucose isomerase signature 2. 499 516 IPR018189 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 CDD SIS_PGI_1 147 312 IPR035476 -
Aed3g1717 603 CDD SIS_PGI_2 358 522 IPR035482 -
Aed3g1717 603 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 603 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 Hamap Glucose-6-phosphate isomerase [pgi]. 78 526 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed3g1717 603 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1717 Aed-Chr3 21799657 21806369 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1717 K01810 - gmx:100809452 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1717 3 21799657 21806369 Aed3g1717 3 21799657 21806369 ECH