Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1704 ATGGGCGAGTTTACTACCGTCGCGTTAAACCCTTCCAAAACCTTCCGCTCCGATATTCTCCTATCCACCACCAACCGCACTTCCCCGGCGGTGCGTGCGTTTCAAACCTCAATCGCTTTCAAACCGCGCGCGTTTCGAGGAATCCGCGCTTCGGTGATGCCAAGAGAGGGTCAGCAACAGCAGGCGTCTCTCGGAGACGCTCTCGTCAGCAGTCCGCGACGAAACGACGTCGTCGAGGCCATCAGAAGAACCGCCGCACTCTCTAACTGCCTCTCCGAAACGAACCTTCACGCCACCGTTCCGAGTCTCGACTCCAAAATCCGCGGCAAAGTTCGAGATATATACGACGCTGGGGATTACCTCGTTTTGGTGACCACTGATCGGCAGAGTGCGTTTGATCGGATTCTTGCCTCTATTCCTTTCAAAGGCCAGGTTCTCAATCAGACGAGTTTGTGGTGGTTTGAAAGAACTAAGCACATCGTCTCTAACGCGGTTGTGTCAGCTCCAGATAACAATGTTACTATAGCTAGGAAATGTTCAGTTTTCCCAATTGAGTTTGTTGCCAGAGGGTATGTCACTGGAAGTACTGATACATCTCTATGGACAGTCTACAATAACGGCGTTAGGAACTATTGTGGAAATGCCCTCCCAGATGGAATGGTAAAAAATCAGAAGTTGCCTGAAAATATACTCACTCCAACAACCAAGGCTGCCGATCATGATGTTCCTATCACTCCAGATGAGATTATAGAAAGGGGACTGATGACTCAAGCTGATTATGAAGAAGCAAGTGAAAAAGCATTATCCTTGTTTGAATATGGACAGCAAGTGGCTTTGGAGCATGGCCTCATATTGGTAGACACTAAGTATGAGTTTGGGAAGGCAAATGATGGTTCAATTATGTTGATTGATGAGGTCCATACTCCTGATTCAAGTAGATATTGGATTGCCAATTCTTACCTGGAGCGCTTTCAAAACGGTGTTGAGCCTGAAAATATTGACAAGGAGTTCTTGAGGCTGTGGTTTAAAAGTCACTGCAATCCATATGAAGACGAGGTCCTTCCTGATGCTCCTGAAGATCTTGTCTGTGAATTAGCCTGGCGATACATCTTCTTGTATGAGACTATAACAAAATCAAAGTTTGAGGTGCCATTGACCGAGGAGCCTATACATGACCGGATTTCGCGAAATGTTACATCTGCCCTGTCATCCCTAAAGTAG 1221 0.4685 MGEFTTVALNPSKTFRSDILLSTTNRTSPAVRAFQTSIAFKPRAFRGIRASVMPREGQQQQASLGDALVSSPRRNDVVEAIRRTAALSNCLSETNLHATVPSLDSKIRGKVRDIYDAGDYLVLVTTDRQSAFDRILASIPFKGQVLNQTSLWWFERTKHIVSNAVVSAPDNNVTIARKCSVFPIEFVARGYVTGSTDTSLWTVYNNGVRNYCGNALPDGMVKNQKLPENILTPTTKAADHDVPITPDEIIERGLMTQADYEEASEKALSLFEYGQQVALEHGLILVDTKYEFGKANDGSIMLIDEVHTPDSSRYWIANSYLERFQNGVEPENIDKEFLRLWFKSHCNPYEDEVLPDAPEDLVCELAWRYIFLYETITKSKFEVPLTEEPIHDRISRNVTSALSSLK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1704 406 PANTHER BNAC03G41880D PROTEIN 7 405 - -
Aed3g1704 406 Pfam SAICAR synthetase 108 352 IPR028923 -
Aed3g1704 406 PANTHER PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE 7 405 - -
Aed3g1704 406 Gene3D Phosphorylase Kinase; domain 1 93 181 - -
Aed3g1704 406 Gene3D - 182 326 - -
Aed3g1704 406 SUPERFAMILY SAICAR synthase-like 97 381 - -
Aed3g1704 406 Hamap Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 103 378 IPR028923 -
Aed3g1704 406 CDD SAICAR_synt_Sc 108 377 - -
Aed3g1704 406 ProSitePatterns SAICAR synthetase signature 2. 285 293 IPR018236 GO:0004639|GO:0006164
Aed3g1704 406 ProSitePatterns SAICAR synthetase signature 1. 181 195 IPR018236 GO:0004639|GO:0006164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1704 K01923 - gmx:100801209 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1704 3 21678119 21682946 Aed3g1704 3 21678119 21682946 ECH