Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1703 ATGAGAAGGTTCACGTGGTTCACGCCGGTAGGTGGAGGAACGAAAATTTCAAAACCACTCGAAATCACTGTTTATTTTTCTCTGGTATCGTTGTTCACACTATCAATTCTTTCAATGCAGTATCGGCGCCATTTGATTTCGTCTCTGACTTCAGAATCTCTCGTGGATAAAGGAGAATCGTCATTCAGCAAATTCTTGCCGTCTCGCCAATCGTTTTTGCTCGCTCGAGGCACGTTCCGAATTTCTCTTGTTTTGCCTTTGGTCAATTGCGGTTTCGTCACGAAAACGGAGGAGTCTCTGATTCCAAGAACACCGTTAAGATATCGTTATTTTCATGCCACAGCGTTTTCTTCTTCGGCTGACCAAGACTACTATCAAGCTCTTGGTATTCCTGAAAATGCCAGTCAGGACGAGATAAAGAAGGCATTTCACTCGCTTGCTAAAAAGTACCATCCAGATGCAAATAAGAATAATCCATCTGCTAAGAGGAAATTTCAAGATATAAGAGAAGCTTATGAGACATTGAGAGACTCTAAAAAGAGAGCAGAATATAACAGGGTAATGCGTACTCATGGTTCAGAAGACATAGAAAATGATCGTGATGATGCAGAGAGGTTTAGAAATGCTTATCGTTCTCATTTTTCTGATTCATTTCATAAAGTATTCTATGAGATATTTGAAGAAGCAACAACTCAATTCTCATCAAATATAGAGGTGGAGTTGTCTCTTACTTTCTCAGAAGCAGCGAGAGGATGCACCAAACATGTGTCATTTGATTCATTAGTTCCCTGTGATCATTGCAAACCTAGGATGAGCAGTGGCTGCATTGACATTAGGGTAGCTCCTCTCCCTTCTCCTAGCTCTTGCATTGGAGAGATTAGTATGGGCAGGGCTATCCACTTGATGCTATCCCAAAAGTTTGTCCAACATGCAGGGGCTCAGGTCGAGTTACAATCCCCCCATTTACATCAACATGCATTACTTGTAAAGGATCGGGACGAGTCATTAAGGACTCTTGTGTATCATGTAGAGGATCTGGGGTGGTTGAAGGGGTTAAAGAGGTTAAAGTTACAATACCAGCAGGTGACCGAGGATTCAATCTTTGTCAGAGATGGTGCAGATATCTATGTGGATTCTAATATTAGCTTTACACAGGCTATTCTCGGTGGCAAAGTTGAGGTTCCTACTTTATCTGGGAAGACGCAGTTAAAAATACCCAAGGGTGTGCAACATGGACAGCTTCTAGTATTAAGAGGCAAAGGACTACCAAAGCATGGATTTCTTGTACATCATGGGGATCAGTATGTTCGATTCCGTGTTAACTTTCCCATTGAAATCAATGAACGACAACGTGCTATACTTGAAGAACTTGCTAAGGAGGAAATAAAGGAGGGAAACAGCTCTTCATTTGAAGGAAATTGGTGGCAGCGAATTCTTGAACACACAACGGGTCCAAAGTTTATGCTGGAGCTATCTATGATGATATTATTCCTTCTCTTCATTAACAAAGTGTTGAGCTGA 1521 0.4149 MRRFTWFTPVGGGTKISKPLEITVYFSLVSLFTLSILSMQYRRHLISSLTSESLVDKGESSFSKFLPSRQSFLLARGTFRISLVLPLVNCGFVTKTEESLIPRTPLRYRYFHATAFSSSADQDYYQALGIPENASQDEIKKAFHSLAKKYHPDANKNNPSAKRKFQDIREAYETLRDSKKRAEYNRVMRTHGSEDIENDRDDAERFRNAYRSHFSDSFHKVFYEIFEEATTQFSSNIEVELSLTFSEAARGCTKHVSFDSLVPCDHCKPRMSSGCIDIRVAPLPSPSSCIGEISMGRAIHLMLSQKFVQHAGAQVELQSPHLHQHALLVKDRDESLRTLVYHVEDLGWLKGLKRLKLQYQQVTEDSIFVRDGADIYVDSNISFTQAILGGKVEVPTLSGKTQLKIPKGVQHGQLLVLRGKGLPKHGFLVHHGDQYVRFRVNFPIEINERQRAILEELAKEEIKEGNSSSFEGNWWQRILEHTTGPKFMLELSMMILFLLFINKVLS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1703 506 Pfam DnaJ domain 123 185 IPR001623 -
Aed3g1703 506 PANTHER CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL 81 270 - -
Aed3g1703 506 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 361 484 - -
Aed3g1703 506 PRINTS DnaJ domain signature 125 143 IPR001623 -
Aed3g1703 506 PRINTS DnaJ domain signature 160 180 IPR001623 -
Aed3g1703 506 PRINTS DnaJ domain signature 143 158 IPR001623 -
Aed3g1703 506 ProSitePatterns Nt-dnaJ domain signature. 165 184 IPR018253 -
Aed3g1703 506 Gene3D - 364 471 - -
Aed3g1703 506 SUPERFAMILY HSP40/DnaJ peptide-binding domain 368 454 IPR008971 GO:0006457|GO:0051082
Aed3g1703 506 ProSiteProfiles dnaJ domain profile. 123 188 IPR001623 -
Aed3g1703 506 CDD DnaJ_C 361 443 - -
Aed3g1703 506 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 81 270 - -
Aed3g1703 506 SMART dnaj_3 122 180 IPR001623 -
Aed3g1703 506 Gene3D DnaJ domain 119 235 IPR036869 -
Aed3g1703 506 PANTHER CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL 361 484 - -
Aed3g1703 506 SUPERFAMILY Chaperone J-domain 119 215 IPR036869 -
Aed3g1703 506 Coils Coil 444 464 - -
Aed3g1703 506 Pfam DnaJ C terminal domain 360 443 IPR002939 -
Aed3g1703 506 CDD DnaJ 123 177 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1703 Aed-Chr3 21669124 21677065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1703 123 219 Miscellaneous Gene Families AT1G16680 31.373 3.47e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1703 - - gmx:100809440 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1703 3 21669124 21677065 Aed3g1703 3 21669124 21677065 ECH