Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1700 ATGCTTAGCATTAAGGAATTAGTTGAATCGAATTTTCTGAGCTCTGTTCCCTCCAACTACATTTGCCTTAAAAATCCCGAAGATTCCATATTGCATTATGAAACAGAGAACATTCCAACCATTGATTTTTCCGAACTCACCTCTTCCAATCCCAATGAACGCTCCAAGGCTGTCCAACAGCTAGGCGATGCTTGCCGCGACTGGGGTTTCTTCATGCTAATAAATCACGGTGTGTCGGAGACAATAATGAATAAGATGCTTAGGGCAAGCCAGAGCTTTTTTGACCTAACTGAGGAAGAAAAAAGGGAGTATGCAGGAACGAAGATACTGAGCAATGGGAAATACAAGAGCATTCTCCATCGTGCTGTTGTGAATACGAAAGGCACACGAATTTCCGTGGCTACAGCACACGGGGCACCGCTTGACACGAGTGTGGGGCCCGCACCAGAGCTGCTTGGCGATGATAAGCCCCCTGCATACCGTTCCATAAAATACAGAGATTACATTCACTTTCAGCAAAGCAATGAACTCGACAGAAGGACCTGCTTGGATCGTATTAGGATTTGA 567 0.4533 MLSIKELVESNFLSSVPSNYICLKNPEDSILHYETENIPTIDFSELTSSNPNERSKAVQQLGDACRDWGFFMLINHGVSETIMNKMLRASQSFFDLTEEEKREYAGTKILSNGKYKSILHRAVVNTKGTRISVATAHGAPLDTSVGPAPELLGDDKPPAYRSIKYRDYIHFQQSNELDRRTCLDRIRI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1700 188 Gene3D - 108 186 IPR027443 -
Aed3g1700 188 PANTHER OS08G0480200 PROTEIN 110 184 - -
Aed3g1700 188 PANTHER OS08G0480200 PROTEIN 19 109 - -
Aed3g1700 188 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 118 IPR026992 -
Aed3g1700 188 SUPERFAMILY Clavaminate synthase-like 4 107 - -
Aed3g1700 188 Gene3D - 1 107 IPR027443 -
Aed3g1700 188 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 110 184 - -
Aed3g1700 188 SUPERFAMILY Clavaminate synthase-like 109 177 - -
Aed3g1700 188 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 19 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1700 Aed-Chr3 21640149 21641980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1700 108 188 Glycosyltransferase AT5G59530 34.524 2.64e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1700 - - gmx:100799432 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1700 3 21640149 21641980 Aed3g1700 3 21640149 21641980 ECH