Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1640 ATGGCTCTCCATCACCACTCCTCCATTGCCACCATTTTTTTCCTTCTACTCACTCTCCACCACCACCACCACCACGCCGAGTCAACTCAGCCTCCCTATTCCTGCGGCTCGTCCTCCAACTACGACTACCCATTCTGCAACACCAAGCTCCCCATCACCAAAAGAGCCCAGGACCTCGTCTCGCGCCTCACTCTCGACGAGAAACTCGCCCAACTCGTCAACACAGCACCCGCCATTCCCCGACTCGGCATCCCGAGCTACCAGTGGTGGAGCGAGGCGCTCCACGGCGTCGCCGACGCCGGCTACGGCATCAGATTCAACGGCACTATCAAATCCGCCACCAGCTTCCCCCAAGTCATTCTCACCGCCGCCTCCTTCGACCCAATCCTCTGGTACCAAATTAGCAAGACGATTGGGAAGGAAGCTCGGGCTGTGTACAATGCGGGGCAAGCGACGGGGATGACGTTTTGGGCGCCGAACATAAACGTATTCAGGGATCCACGGTGGGGGAGAGGGCAAGAAACTGCAGGGGAAGATCCTCTCATGAATGCAAAGTATGCTTTGGCGTATGTGAGAGGGCTTCAGGGTGATTCTTTCGAAGGAGGGAAACTTGGGGAGAGCCTTCAAGCTTCCGCGTGTTGCAAGCACTTCACCGCCTACGATTTGGACCATTGGAAGGGCCTCGATCGCTTTGTCTATGATGCTCGTGTCACGTCGCAAGATTTGGCAGACACGTACCAACCTCCATTCCAAAGTTGTATAGAGAAGGGTCGAGCCAGTGGGATAATGTGTGCCTACAACCGTGTGAATGGGGTTCCAAACTGTGCAGATTTCAACCTTTTAACCAAAACCGCAAGACAACAATGGAAATTCGATGGGTATATTACGTCAGATTGTGAAGCAGTCGCTATCATACACGAGAAGCAAGGTTATGCAAAAACAGCAGAGGACGCTATAGCCGATGTCTTTAGGGCAGGGATGGACGTGGAGTGTGGTGATTACATAACCAAGCATGCAAAATCAGCAGTGTCCCAGAAAAAACTACCAATATCTCAAATCAATCGCGCCCTTCAGAACCTCTTCACCATAAGAATTCGACTGGGCTTATTCGACGGAAACCCCACAAACCTTCCATTCGGCACAATTGGTCCCAACGAAGTGTGCTCCAAACAAAACCTCCAGCTAGCCCTCGAAGCAGCAAGAGACGGCATAGTCCTTCTGAAGAACACAGACTCACTCCTCCCACTTCCAAAAACAAACCCGACAATCGCTCTCATTGGCCCCAACGCGAATGCCTCATCGAAAGTCTTCTTAGGAAACTACTATGGTCGTCCATGCAACTTGGTGACACTGTCGCAGGCCTTTGAGGGGTACTCCAAGGACAAGGTTGTTTACCACCCCGGCTGCGATGATGGCCCGCAATGCGGCGCTGCGCGGATAGAGGAGGCGATGGCGGTTGCTAAGAAGGCGGAGTATGTGGTGTTGGTTATGGGGTTGGATCAGAGTCAGGAGAGGGAGTCGCATGATAGGGAGTACTTGGGGCTGCCGGGGAAGCAGGAGGAGCTTATTAAGAGGGTTGCTATGGCTTCTAAGAGGCCTGTGGTTTTGGTGCTCCTGTGTGGTGGTCCTGTTGATGTTAGTTTTGCTAAGGTTGATGATAGGGTTGGTGGGATCTTGTGGGGTGGGTACCCTGGGGAACTTGGAGGTGTGGCTCTGGCTCAGGTTATCTTTGGTGATCATAATCCAGGAGGAAGATTACCATTGACTTGGTACCCAAAAGATTTCATCAGAGTACCAATGACAGACATGAGAATGAGAGCAGATCCATCATCAGGCTACCCTGGCAGAACCTACAGATTCTACACCGGTCCAAAGGTCTACGAATTCGGCTACGGCTTAAGCTACACAAAATATTCCTACAAGCTCCTCTCTCTCTCACACACCACCCTCCACATCAACTATTCATCCACCCATTACTCAACCTCCCAAAACTCAGAAACCACACGCTACAAACTTGTTTCCGATATGGGGGAAGAAGCATGCAAAACCATGTCCCTAACAGTCACATTGGGCGTCACGAATCGCGGCGGCATGGCGGGGAAGCACCCCGTGCTGCTGTTTGTGAGGCAGGGGAAGGTGAGGGATGGGAATCCGGTGAAGCAGTTGGTGGGGTTCCAGAGTGTGAAGCTGGATGCAGGGGAAACGGCTCGAGTGGGGTTTGAGTTGAACCCTTGTGAGCATCTTAGCGTGGCGAATGAGGCTGGTTCGATGCTGATTCAAGAAGGCTCCTATTTGTTGCTTGTTGGGGACAACCAAGAAGAGTACCCACTTGAGATCACACTTTGA 2346 0.5222 MALHHHSSIATIFFLLLTLHHHHHHAESTQPPYSCGSSSNYDYPFCNTKLPITKRAQDLVSRLTLDEKLAQLVNTAPAIPRLGIPSYQWWSEALHGVADAGYGIRFNGTIKSATSFPQVILTAASFDPILWYQISKTIGKEARAVYNAGQATGMTFWAPNINVFRDPRWGRGQETAGEDPLMNAKYALAYVRGLQGDSFEGGKLGESLQASACCKHFTAYDLDHWKGLDRFVYDARVTSQDLADTYQPPFQSCIEKGRASGIMCAYNRVNGVPNCADFNLLTKTARQQWKFDGYITSDCEAVAIIHEKQGYAKTAEDAIADVFRAGMDVECGDYITKHAKSAVSQKKLPISQINRALQNLFTIRIRLGLFDGNPTNLPFGTIGPNEVCSKQNLQLALEAARDGIVLLKNTDSLLPLPKTNPTIALIGPNANASSKVFLGNYYGRPCNLVTLSQAFEGYSKDKVVYHPGCDDGPQCGAARIEEAMAVAKKAEYVVLVMGLDQSQERESHDREYLGLPGKQEELIKRVAMASKRPVVLVLLCGGPVDVSFAKVDDRVGGILWGGYPGELGGVALAQVIFGDHNPGGRLPLTWYPKDFIRVPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYTKYSYKLLSLSHTTLHINYSSTHYSTSQNSETTRYKLVSDMGEEACKTMSLTVTLGVTNRGGMAGKHPVLLFVRQGKVRDGNPVKQLVGFQSVKLDAGETARVGFELNPCEHLSVANEAGSMLIQEGSYLLLVGDNQEEYPLEITL 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1640 781 Gene3D - 55 377 IPR036962 GO:0004553|GO:0005975
Aed3g1640 781 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 5 780 - -
Aed3g1640 781 Pfam Glycosyl hydrolase family 3 N terminal domain 109 361 IPR001764 GO:0004553|GO:0005975
Aed3g1640 781 PANTHER SUGAR HYDROLASE-RELATED 5 780 IPR044993 GO:0009044|GO:0045493
Aed3g1640 781 Pfam Glycosyl hydrolase family 3 C-terminal domain 404 635 IPR002772 GO:0004553|GO:0005975
Aed3g1640 781 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 404 638 IPR036881 GO:0004553|GO:0005975
Aed3g1640 781 Gene3D Immunoglobulins 652 781 IPR013783 -
Aed3g1640 781 SMART Fn3_like_2 702 772 IPR026891 -
Aed3g1640 781 SUPERFAMILY (Trans)glycosidases 43 403 IPR017853 -
Aed3g1640 781 Pfam Fibronectin type III-like domain 704 771 IPR026891 -
Aed3g1640 781 Gene3D - 390 636 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1640 Aed-Chr3 20990515 20995704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1640 24 781 Glycoside Hydrolase AT1G78060 62.827 0.0 984
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1640 - - gmx:100780688 1385.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1640 3 20990515 20995704 Aed3g1640 3 20990515 20995704 ECH