Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1634 ATGACGAGTTATATCTATGCCAACCTCAAAATATGGCTTCTTAATTTGGTTACCTTGTTTAGTATTATGCTTTCCTTGTCCCATGGAAGACCATATTCACATGCCCAGAATTTTCAAGTGAGAGCAGTTAATCTAGGTGGTTGGCTCGTTACTGAAGGTTGGATGAAACCTTCTCTCTTCGATGGCATTCCAAATAATGACTTCTTGGATGGAACTGGTCTTCAGTTCAAGTCCGTGACAACACGAAAATACCTTTGTGCTGAGACCGGAGGAGGAACCATCATAGTTGCAAATCGCACATCTGCTTCGGTTGTGGAGGCTAAACGAGGATACTTTCAGATTCAGAGTTTTGTGGGGTTAGATGGGGTTAAAGTCGTGGCTGTTTCCAACATTTCCACTGATTCATTGACATTTCATGTTGTAAAGGAAAGTGGTAACTCTAGCCGCGTTCGTATCAAAGCTTCCAATGGATACTTCCTGCAGGCAAAGACAGAGGATTTGGTGACTGCTGATGTATCAAAGGTCAACGGATGGGGAGATGATGATCCTTCAGTTTTTGTAATGAAAATTGCTAAAAGGATGCAAGGGGAATTCCAAGTAACACATGGCTATGGTCCCATAAAAGCTCCCCAAGTTATGAAGGAACATTGGAACACTTTTATAGTTGAAGATGATTTCAAGTTCATAGCTAGTAATGGACTGAATGCTGTTAGAATTCCAATTGGGTGGTGGATAGCAAGTGGTCCAACTCCACCCCCACCATATGTTGGAGGCTCCTTGAATGCACTAGATCATGCCTTTTTATGGGCACAGAAATATGGATTGAAAATCATTCTTGACCTTCATGCTGCACCCGATTCTCAAAATGGTTTTGAGCACAGCTCTTCAAGAGATGTTGAGCTAATCAATGAGCCTCTCTCACCTGGTGTGACACTAGAGGCCTTGAACAAGTACTATAAGGCTGGTTATGAAGCAGTGCGCAAGCACTCTTCCACAGCTTATGTGGTGTTATCAAATAGGCTTGGACCCTCAAATCCTAGAGAACTTTTCCCTCTTGCAAATGGTTTTATGCGATCTGTGATTGATGTTCATTACTACAACCTCTTTCAAGATGTATTTAATGACATGACTGTCCAACAGAACATTGATTTCATCCACAACAATCGTTCATCTGATTTGAGTTTTGTTACAACCTCAAATGGCCCTCTTACTTTTGTTGGGGAATGGGTTGCTGAATGGCAAGTCGGTGGAGCTTCAAAAGAAGATTATCAAAGATTCGCTAGGGCCCAATTAGACGTTTTTGGGCGAGCAACATTTGGGTGGGCATATTGGGCTTTCAAAAACGTCAACAATCATTGGAGTTTGGAGTGGATGATCAAGAATGGTTATATTAAGCTGTAG 1401 0.419 MTSYIYANLKIWLLNLVTLFSIMLSLSHGRPYSHAQNFQVRAVNLGGWLVTEGWMKPSLFDGIPNNDFLDGTGLQFKSVTTRKYLCAETGGGTIIVANRTSASVVEAKRGYFQIQSFVGLDGVKVVAVSNISTDSLTFHVVKESGNSSRVRIKASNGYFLQAKTEDLVTADVSKVNGWGDDDPSVFVMKIAKRMQGEFQVTHGYGPIKAPQVMKEHWNTFIVEDDFKFIASNGLNAVRIPIGWWIASGPTPPPPYVGGSLNALDHAFLWAQKYGLKIILDLHAAPDSQNGFEHSSSRDVELINEPLSPGVTLEALNKYYKAGYEAVRKHSSTAYVVLSNRLGPSNPRELFPLANGFMRSVIDVHYYNLFQDVFNDMTVQQNIDFIHNNRSSDLSFVTTSNGPLTFVGEWVAEWQVGGASKEDYQRFARAQLDVFGRATFGWAYWAFKNVNNHWSLEWMIKNGYIKL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1634 466 SUPERFAMILY Actin-crosslinking proteins 74 178 IPR008999 -
Aed3g1634 466 PANTHER PUTATIVE-RELATED 299 466 - -
Aed3g1634 466 PANTHER FASCIN 9 298 IPR010431 GO:0007015|GO:0051015
Aed3g1634 466 PANTHER PUTATIVE-RELATED 9 298 - -
Aed3g1634 466 Gene3D Glycosidases 32 91 - -
Aed3g1634 466 Gene3D Glycosidases 299 466 - -
Aed3g1634 466 Gene3D Glycosidases 182 298 - -
Aed3g1634 466 SUPERFAMILY (Trans)glycosidases 36 464 IPR017853 -
Aed3g1634 466 Pfam Cellulase (glycosyl hydrolase family 5) 300 448 IPR001547 GO:0004553|GO:0071704
Aed3g1634 466 Pfam Cellulase (glycosyl hydrolase family 5) 215 285 IPR001547 GO:0004553|GO:0071704
Aed3g1634 466 PANTHER FASCIN 299 466 IPR010431 GO:0007015|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1634 Aed-Chr3 20938298 20942559 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1634 - - gmx:100790619 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1634 3 20938298 20942559 Aed3g1634 3 20938298 20942559 ECH