Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1626 ATGCCTCCCCCCTCTATCCCTTCGCCACGTTCACGGGAAAACATTATTGGAACCCACAAAGGTGCACACTGCGCACCCCACCCTCTGAAGAGAGAAGGAAAAACAAAACAAAAAAGCTTCAAAGTTTCAAACTTTGCACCACCCCACCTCCCAATTCCAGTATCAGACCCGTTAACCTTTTTATTTTCCCACCTTAGTTGGGTTCTCTGGGTTTTTTATCCTCTTCTTTTTTCCATGGCGATTGGGCTTCTTCTTTGGCTTTTACTGGCCAAGGATCTTGCTGTGGAAAGTTCTGTGGGTGTCACATTTTCTTCCAGGCTCATTCACCGGTTCTCTAAGGAGGCTAAGGCTCATTTGGCTTCAAGGGGAAACAACGATTCTGTGCCTGAGAGGAACAGCTCTGAGTATTTTAGGTTTCTTCTTAGAAGTGACGTCACACGGCAGAGGATGAGGCTTGGCTCGCAGTTTGAAACTCTGTACCCTTCTGAAGGAGGCCAGACCTTCTTCTTTGGCAATGCGTTTTATTGGTTGCATTACACATGGATTGATATAGGGACTCCAAATGTTTCATTTCTTGTTGCATTGGATGCTGGAAGTGACATGCTTTGGGTTCCCTGTGACTGCATTGAATGTGCTTCCTTGTCTGCTGGTAATTACAATGTGTTGGACAGGGATCTGAGTCAGTATAGACCATCATTATCCAACACCAGCAGACACCTACCTTGTGGTCATAAGTTGTGTGATTCGCATTCCTATTGCAAAGGCTCTAAGGATCCTTGCCCTTATAATGTTCAGTACAACACAATTAATACCTCAAGTTCTGGATATCTTTTTGAAGACAGACTACATTTGGCATCTGATGTCAGACATGCAGTACAAAATTCTGTGCAAGCCTCTATCATTTTAGGGTGTGGAAGGAAACAAACTGGTGAGTATTTAAAAGGAGCTGGTCCTGATGGTGTTCTAGGGCTAGGGCCCGGAAACATTTCAGTCCCAAGTTTACTGGCAAAGGCAGGACTTATTTGGAATTCTTTTTCAATTTGTTTCGATGAGAATGAATCTGGGAGAATTATCTTTGGTGACCAAGGGCATGTCACCCAACATTTTACACCATTCCTGCCCATAGACGGGGAATTTATTGCCTATGTAGTTGGAGTAGAGAGCTTTTGTGTTGGGAGCTTATGTCTCAAGGAAACTAGGTTTCAAGCACTTATTGACAGTGGATCTTCTTTCACATTTCTTCCCAATGAAGTTTATCAAAAAGTTGTAACCGAGTTCGACAAAGAAGTAAATGCAACCAGGATTGTTCTCCCAGACTCATGGGAGTACTGCTATAATGCCAGTTCACAGGAGTTGATTAACATTCCCCCATTGAAACTCACTTTCTCTAGGAATCAAACTTTTTTAATTCAAAATCCTATTTTTGCTGATCCTGCTAGCCAGGAACGGGAATACACTGTCTTTTGTTTGCCTGTAAGCCCTTCTGATGACAACTATGCTACCATCGGACAGAACTTCCTGATGGGTTATCGAATGGTCTTTGATCGGGAGAATCTAAAGTTTGGCTGGTCTAGATGGAATTGTCAAGATAGAGCAAGTTTTGCATCACCTTCCAACGGTGGATCACCAAACCCTTTACCAGCGAATCAGCAGCAGAGCATCCCTAATGCTCGTGCTGTACCGCCGGCCATGGCTGGACACACATCCGTCAAACCCTCTGCTGCCACACCTGCTGGACTTGCCTCTAGGCATTCCTTAGTTTCATTGTTACTGATACATGTCACCTTTTTTTGGCTTTGGTTATCTTGTTAA 1812 0.4387 MPPPSIPSPRSRENIIGTHKGAHCAPHPLKREGKTKQKSFKVSNFAPPHLPIPVSDPLTFLFSHLSWVLWVFYPLLFSMAIGLLLWLLLAKDLAVESSVGVTFSSRLIHRFSKEAKAHLASRGNNDSVPERNSSEYFRFLLRSDVTRQRMRLGSQFETLYPSEGGQTFFFGNAFYWLHYTWIDIGTPNVSFLVALDAGSDMLWVPCDCIECASLSAGNYNVLDRDLSQYRPSLSNTSRHLPCGHKLCDSHSYCKGSKDPCPYNVQYNTINTSSSGYLFEDRLHLASDVRHAVQNSVQASIILGCGRKQTGEYLKGAGPDGVLGLGPGNISVPSLLAKAGLIWNSFSICFDENESGRIIFGDQGHVTQHFTPFLPIDGEFIAYVVGVESFCVGSLCLKETRFQALIDSGSSFTFLPNEVYQKVVTEFDKEVNATRIVLPDSWEYCYNASSQELINIPPLKLTFSRNQTFLIQNPIFADPASQEREYTVFCLPVSPSDDNYATIGQNFLMGYRMVFDRENLKFGWSRWNCQDRASFASPSNGGSPNPLPANQQQSIPNARAVPPAMAGHTSVKPSAATPAGLASRHSLVSLLLIHVTFFWLWLSC 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1626 603 Pfam Xylanase inhibitor N-terminal 179 361 IPR032861 -
Aed3g1626 603 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 82 550 - -
Aed3g1626 603 Pfam Xylanase inhibitor C-terminal 398 524 IPR032799 -
Aed3g1626 603 PRINTS Pepsin (A1) aspartic protease family signature 500 515 IPR001461 GO:0004190|GO:0006508
Aed3g1626 603 PRINTS Pepsin (A1) aspartic protease family signature 403 414 IPR001461 GO:0004190|GO:0006508
Aed3g1626 603 PRINTS Pepsin (A1) aspartic protease family signature 184 204 IPR001461 GO:0004190|GO:0006508
Aed3g1626 603 ProSiteProfiles Peptidase family A1 domain profile. 178 524 IPR033121 -
Aed3g1626 603 PANTHER ASPARTYL PROTEASES 82 550 IPR001461 GO:0004190|GO:0006508
Aed3g1626 603 CDD pepsin_like 182 525 IPR034164 -
Aed3g1626 603 Gene3D Acid Proteases 362 536 IPR021109 -
Aed3g1626 603 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 403 414 IPR001969 GO:0004190|GO:0006508
Aed3g1626 603 Gene3D Acid Proteases 171 361 IPR021109 -
Aed3g1626 603 SUPERFAMILY Acid proteases 173 530 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1626 Aed-Chr3 20834356 20838792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1626 154 528 Miscellaneous Gene Families AT1G44130 25.373 1.93e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1626 - - lang:109359439 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1626 3 20834356 20838792 Aed3g1626 3 20834356 20838792 ECH