Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1619 ATGGCGAGAAAAAATAGTAACTGTGCCATATGCGAGAATTCGAATCAAGCTTCCATATGCTCAATATGTGTCAACTACAGGTTGAATGAGTATAATACTTCCTTAAAGTCACTAAAAGACCGTCGAGATTCGTTGTACTCAAAATTGAGCGATGTTCTTGTGCGTAAGGGAAAGGGAGATGATCAAGTAAATTGGAGAGTGCTTCAACATGAAAAGCTTTCAAGGTTGAAAGAGAAGCTTCGTCAGAGTAAAGAACAAGTTATGCAAGGAAGAGCTAAGATAGAGAGTATGTCTGCTGATTTGAAACTTAAATTTGGGTTGCTTGAATCTGCCCTTTCTACGTTGGAAAAAAATCGAGTGGAACAACTGGAGAAGTTCTACCCTAATCTTATATGCACTCAGAGCTTAGGGCATGTGGCAATTACCTCTGAGCGTCTTCATAAGCAGTCTGTGGTCATAAAACAGATATGCAAGTTGTTCCCACAACGCCGGGTAGCCATAGAGGGAGAGAGAAGGGATGGTTGTAGTGGTCAAAATGATCAAATTTGCAATGCACGATTACCCAGAGCACTTGATCCCCACTCTGTTCCATCAGAAGAGCTTTCTGCTTCTTTGGGATACATGGTGCAACTTCTAAATCTTATTGTTCACAATTTGGCTGCCCCAGCACTTCATAACTCAGGTTTTGCGGGTTCTTGCTCTCGGATATGGCAACGAGATTCTTATTGGAATGCACGTCCTTCCTCAAGGAGCAATGAATATCCTCTTTTTATACCTCGCCAAAATTATTGTTCTACTGGTGGAGAAAACTCATGGTCTGATAGAAGCTCAAGCAACTTCGGAGTTGCTTCAATGGAATCTGAGAGGAGACCTCGCCTAGATTCATCTGGGAGTAGTAGTAGCTTTAACTATTCCTTAGGTTCTTCACATTCTGTTCAAACACACAAAGATTTGCAGAAAGGAATTTCACTTTTAAAGAAAAGTGTAGCATGCATCACAGCTTACTGTTACAACTCCTTATGCTTGGATGTCCCTTCTGAGGCATCTACATTTGAGGCATTTGCGAAGTTATTGGCTACACTCTCATCATCCAAGGAAGTTCGATCTGTTTTTTCCTTGAAAATGGCTCGCTCTAGGACATGCAAGCAAGTTCAACAATTGAACAAATCTGTATGGAATATGAATTCTGCTATTTCATCAACTACTCTGCTGGAAAGTGCGCATTCTGCACCCACAACGACAATTGAAAATTATCTGCCAAATTCTACTGCTAGTTTTCTTTACACCACTGATTTATCCGACGGAAAAAATGAGTGCCTAATTGAAGGGTGGGATATTGTTGAGCATCCCACTTTTCCTCCCCCACCATCGCAAAGTGAGGATGTTGAGCACTGGACTCGAGCCATGTTCGTAGATGCTAAAAGGAAGTGA 1431 0.4151 MARKNSNCAICENSNQASICSICVNYRLNEYNTSLKSLKDRRDSLYSKLSDVLVRKGKGDDQVNWRVLQHEKLSRLKEKLRQSKEQVMQGRAKIESMSADLKLKFGLLESALSTLEKNRVEQLEKFYPNLICTQSLGHVAITSERLHKQSVVIKQICKLFPQRRVAIEGERRDGCSGQNDQICNARLPRALDPHSVPSEELSASLGYMVQLLNLIVHNLAAPALHNSGFAGSCSRIWQRDSYWNARPSSRSNEYPLFIPRQNYCSTGGENSWSDRSSSNFGVASMESERRPRLDSSGSSSSFNYSLGSSHSVQTHKDLQKGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLLATLSSSKEVRSVFSLKMARSRTCKQVQQLNKSVWNMNSAISSTTLLESAHSAPTTTIENYLPNSTASFLYTTDLSDGKNECLIEGWDIVEHPTFPPPPSQSEDVEHWTRAMFVDAKRK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1619 476 Pfam Vacuolar sorting 38 and autophagy-related subunit 14 8 367 IPR018791 -
Aed3g1619 476 Coils Coil 28 48 - -
Aed3g1619 476 PANTHER DNA-DIRECTED RNA POLYMERASE II PROTEIN 1 476 - -
Aed3g1619 476 Coils Coil 66 93 - -
Aed3g1619 476 PANTHER UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN 1 476 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1619 - - gmx:100776426 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1619 3 20736970 20744338 Aed3g1619 3 20736970 20744338 ECH