Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1610 ATGAAGACTCGTAGTGGCTCCACGAAGATCTCTGCAAAATGGGTTCCAATTTTCTCTGTTTTTTCATTTCTCATTGGAATGCTCATAACAACCAGGATGTGGGACCCACCTGAATCTAACGGGGTGCATTTGTCAAAACACCGACATGAGCAAGAACTGCAAGTAGTATCAGGGGATTGTGCTCCTAAAAAGGCATGCTTTACTCAACCTGTGCAGAATAAGGATGTAATCAGTGAAGTGTACAAAACCCATGAGGCCATTCAATCTCTAGACAAGCAAGTTTCCATGCTTCAGATGGAGCTGGCAGCAGCAAGGAGTACTCGAGAACACAAGATCTCGGATGGTTTGGCTAACAACTTGGCCTCGGAGGCCTCCACTGAAGGCCCTCCCAGGGAGAAGGTGTTTGTAGTGATTGGCATAAACACTGCTTTCAGTAGCAGGAAGCGGCGTGATTCAGTTCGAGAGAGTTGGATGCCTCAAGGTGAACAGCTCCTTCAATTGGAACGTGAGAAGGGAATTGTCATCAGATTCACGATTGGTCACAGTGCAACTTCTAACAGCATTCTAGATCGAGCTATTGATTCAGAAGAAGCCCAGCACAAAGACTTCCTTCGCCTGGAACATGTTGAAGGGTACCATGAATTGTCTGCAAAAACAAAAATTTTCTTTTCTACAGCAGTTGCAAAATGGGATGCTGATTTCTATGTCAAAGTGGATGACGATGTGCATGTCAATTTAGGTGTACTTGCAACAACCCTTGCTCGTCATCGCTCAAAACCGAGGGTCTACATTGGATGTATGAAATCAGGACCTGTTCTTTCTCGAAAGGATGTTAAGTATCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAGGGGAACAAATACTTCCGACATGCAACTGGGCAGATATATGCAATCTCTAAGGATCTAGCCACCTACATTTCCATTAACCAGGCAATATTGCACAAATATGCCAATGAAGATGTGTCACTTGGTGCATGGTTCATTGGTCTGGAAGTTGACCATATAGATGACCGAAGCATGTGCTGTGGGACTCCTCCAGATTGTGAGTGGAAGGCACAAGCAGGTAACATATGCGTTGCATCCTTTGACTGGAGCTGCAGTGGAATCTGCAAGTCAGTAGAGAAGATCAAATATGTGCACTCAAAGTGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCCTTAGTTTAG 1212 0.4488 MKTRSGSTKISAKWVPIFSVFSFLIGMLITTRMWDPPESNGVHLSKHRHEQELQVVSGDCAPKKACFTQPVQNKDVISEVYKTHEAIQSLDKQVSMLQMELAAARSTREHKISDGLANNLASEASTEGPPREKVFVVIGINTAFSSRKRRDSVRESWMPQGEQLLQLEREKGIVIRFTIGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGVLATTLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQAILHKYANEDVSLGAWFIGLEVDHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1610 403 Pfam Galactosyltransferase 148 345 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed3g1610 403 Coils Coil 87 107 - -
Aed3g1610 403 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 395 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed3g1610 403 Gene3D - 125 349 - -
Aed3g1610 403 PANTHER HEXOSYLTRANSFERASE 8 395 - -
Aed3g1610 403 Pfam Domain of unknown function (DUF4094) 11 106 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1610 Aed-Chr3 20668438 20672483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1610 1 403 Glycosyltransferase AT1G77810 70.545 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1610 K20855 - gmx:100793793 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1610 3 20668438 20672483 Aed3g1610 3 20668438 20672483 ECH
Aed3g1610 3 20668438 20672483 Aed10g0251 10 2023680 2027603 PCT