Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1598 ATGCATCCCTTCTGCTGCGTCTCCGTCGTCTCCGACCACTCCTCTCTGCCGCCCAATCCCGCCATGCCTCCTCTCCCTGCCGCCTCGGACTCCTCCGCCAACGGCGGCGAGAGCGGCCGCGCGAGCATACCTCCGGCGCCGGCGGTTGATGTCCAAATCAACGACCTCGTCGGGAACGGAATCTCCGGGATTCTGCACAAGTGGGTGAACTACGGGAAGGGATGGAGGTCGCGCTGGTTCGTGCTCCAGGACGGCGTCCTCTCCTACTACAAGATTCACGGCCCCGACAAGATCGTCGTAAACTCCGAAACCGAGAAGGGATCCAAAGTTATCGGCGACGAATCCGCGCGCATGATTTCCCGCAGCCGCAAATCTGATCACGCCAGCCATCGCCGGAAACCCGTCGGCGAAGTCCATCTCAAGGTTTCGACTATTCGAGAGAGTAGATCAGATGACAAACGGTTTTCGATTTTCACCGGGACTAAGAGACTCCACTTGAGGGCGGACACTCGGGAGGAACGAGTGGCATGGATGGAGGCCCTGCAGGCTGTGAAAGATATGTTTCCCCGCATTTCCAACAGCGAGCTGATGGCACCGGTGGACAGTGTGGCCGTTTCGACTGATAAGCTGAGGCATCGGCTTATGGAGGAAGGTGTAAGTGAGACAGCAATTCAGGACAGTGAGCAAATTATGAGAAATGAGTATGCTGCGCTGCAAAACCAGCTTCTGCTGCTTAAGCAGAAGCAGGGGACGCTAATTGACACTCTGCGGCATTTAGAGACAGAAAAGGTTGATCTGGAGAACACTGTTGTTGACGAGAGCCAAAGACAGAATGATCAAGAGGCTTCCTCTAGATTAAGGCAGGAAAAATCTAGTGAAGCAAGTGCAAGTGAGTCGGAGGATGATAATGAGAGAAATGATGTAGCTGAGGAAGAAACAGATGAAGAGGACACTGCCTTTTTTGACACTCGTGATTTTCTATCATCATCCAATTCTTTTAAAAGTAATGGATCTGATATTAGGGTCTCGTCTTTCTCTTCAGATGATGAAGGACTCTATGCAGTTGAATCAGAGGAGGATTTAGATCCTTCAATTAGATCTGTTGGAACCAACTATCCTTATGTTAAACGACGTAGGAAATTGCCTGACCCTGTTGAAAAGGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATTGGGAAGGATCTAACTAAAGTTTGCCTTCCTGTTTACTTTAATGAGCCTCTCTCGTCTCTGCAAAAATGTTGTGAAGAAACTGAGTATTCATATCTTCTAGACCGAGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGAGTTCTCAATGTTGCTGCTTTCGCTATATCTGCCTATGCTTCAACTGAAGGGAGAATGTGCAAACCATTTAACCCTTTACTGGGGGAAACATATGAGGCTGACTTTCCAGATAAAGGCTTTCGATTTTTCTCAGAGAAGGTCAGTCATCATCCAATGATAGTCGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGAGATAGCAACTTAAAAAGTAAATTTTGGGGTCGGTCAATTCAGCTTGATCCTGTTGGCATTTTGACTTTGGAATTTGATGATGGTGAAGTATTCCAGTGGAGTAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTGTATTGTGATCATTATGGTACAATGCGTATACAGGGAAATCAAGACTACTCATGTAAACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCACCAGGTTCATGGTATTGTTCAGGATAGAAATGGAAAAGTATTGTCTACATTACTCGGAAAATGGGATGACAGCATGTATTATATTAATGGAGACTATAGTGGGAAAGGAAAGGGTTATGAATCGATGTCAGATGCCCATCTACTATGGAAGCGGAGCAAGCCTCCCAAGTTTCCCACTAGATATAACTTCACTCGGTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGGAAGAGCTGCCACCTACTGATTCCAGGTTAAGACCAGATCAAAGGTATTTGGAAAATGGGGAGTATGACATGGCAAATTCAGAAAAGTTGCGGCTAGAACAGAGGCAACGTCAGTCTCGGAAAATGCAAGAGAGCGGTTGGGAACCACGGTGGTTTTCTAGGGATAAAGCAAGCGGCACCTACCGCTACTTAGGAGGATATTGGGAGGCCAGAAAACAAGGAAATTGGAACTCCTGTCCTGACATTTTTGGCCATATTCCTTCTGATCATATTTCAGACGAAGGTAAGCAGAAGAAAGCTGTATCTCAAAGTAAAGTAAAATTGACAGTAATAGTACTTTGTTCAGAAGCTTCCACCATTTAG 2388 0.4585 MHPFCCVSVVSDHSSLPPNPAMPPLPAASDSSANGGESGRASIPPAPAVDVQINDLVGNGISGILHKWVNYGKGWRSRWFVLQDGVLSYYKIHGPDKIVVNSETEKGSKVIGDESARMISRSRKSDHASHRRKPVGEVHLKVSTIRESRSDDKRFSIFTGTKRLHLRADTREERVAWMEALQAVKDMFPRISNSELMAPVDSVAVSTDKLRHRLMEEGVSETAIQDSEQIMRNEYAALQNQLLLLKQKQGTLIDTLRHLETEKVDLENTVVDESQRQNDQEASSRLRQEKSSEASASESEDDNERNDVAEEETDEEDTAFFDTRDFLSSSNSFKSNGSDIRVSSFSSDDEGLYAVESEEDLDPSIRSVGTNYPYVKRRRKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEETEYSYLLDRAYEWGRRGNSLMRVLNVAAFAISAYASTEGRMCKPFNPLLGETYEADFPDKGFRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQDYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKVLSTLLGKWDDSMYYINGDYSGKGKGYESMSDAHLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEELPPTDSRLRPDQRYLENGEYDMANSEKLRLEQRQRQSRKMQESGWEPRWFSRDKASGTYRYLGGYWEARKQGNWNSCPDIFGHIPSDHISDEGKQKKAVSQSKVKLTVIVLCSEASTI 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1598 795 Pfam Pleckstrin homology domain 66 182 - -
Aed3g1598 795 SUPERFAMILY PH domain-like 61 191 - -
Aed3g1598 795 Pfam Oxysterol-binding protein 392 747 IPR000648 GO:0008289
Aed3g1598 795 SUPERFAMILY Oxysterol-binding protein-like 387 768 IPR037239 -
Aed3g1598 795 ProSiteProfiles PH domain profile. 58 186 IPR001849 -
Aed3g1598 795 CDD PH_ORP_plant 61 193 - -
Aed3g1598 795 MobiDBLite consensus disorder prediction 270 321 - -
Aed3g1598 795 SMART PH_update 59 188 IPR001849 -
Aed3g1598 795 MobiDBLite consensus disorder prediction 13 45 - -
Aed3g1598 795 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 2 765 - -
Aed3g1598 795 Gene3D - 478 652 - -
Aed3g1598 795 Coils Coil 256 276 - -
Aed3g1598 795 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 765 IPR000648 GO:0008289
Aed3g1598 795 Coils Coil 228 248 - -
Aed3g1598 795 Gene3D - 59 188 IPR011993 -
Aed3g1598 795 Gene3D - 689 781 - -
Aed3g1598 795 MobiDBLite consensus disorder prediction 303 319 - -
Aed3g1598 795 MobiDBLite consensus disorder prediction 270 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1598 Aed-Chr3 20512663 20519578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1598 K20456 - gmx:100817212 1399.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1598 3 20512663 20519578 Aed3g1598 3 20512663 20519578 ECH