Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1593 ATGGAGGTGTTAAGAGTGCAAACCATAGCATCAGAATCCAATGAAGATGATGCCGCCACCATCCCAACCATGTTTGTTAGGGCGGAAACAGAACAACCAGGCATAACAACCGTCAAAGGGGTGAGCCTCGAGGTGCCAATAATCGATTTTAGTGACCCAAATGAAGAGAAAGTGGTGAATGAGATTGTGGAGGCGAGCAGGGAGTGGGGGATGTTCCAAGTTGTGAACCATGAGATACCTAGTGATGTGATAAAGAGGTTGCAAAGTGTGGGCAAAGAGTTCTTTGAGTTGCCACAAGAGGAGAAAGAGGTAATTGCTAAGTGTGGTGGTAATAATGATTCTATTGAAGGTTATGGTACAAAGCTTCAGAAAGAGGTTAATGGAAAGAAAGGGTGGGTGGATCATTTATTTCATGTTGTTTGGCCACCTTCCTCCATCAATTACCGTTTCTGGCCTAAAAATCCTTCTTCTTACAGTATGTCAAAAGGGTTGGGGCTTGAAGAAAACAAGCTACAGGATGATGCAAATGGAGAAGAGATGCAATACCTATTAAAAATAAATTACTACCCACCTTGTCCACTCCCTGATCTAGTTCTGGGTGTGCCACCACACACAGACATGTCTTACCTCACCATTCTTGTTCCCAACGAGGTGCAGGGCCTCCAAGTCTCTAGGGATGGTCATTGGTACGATGTTAAATATGTCCCCAATGCCCTTGTCATTCACATTGGTGACCAAATGGAGGTTCTGAGCAATGGGAAATATAAGGCAGTTTTTCACAGAACAACTGTAAACAAAGACAAGACAAGAATGTCGTGGCCAGTGTTCATAGAACCCAAAGCAGATCACGAAGTTGGTCCTCACCCAAAGTTTGTTAGCCAAGACAATCCACCAAAATACAAGACCAAGAAATACAAGGATTATGCTTACTGTAAGCTCAATAAAATCCCTCAGTGA 957 0.4336 MEVLRVQTIASESNEDDAATIPTMFVRAETEQPGITTVKGVSLEVPIIDFSDPNEEKVVNEIVEASREWGMFQVVNHEIPSDVIKRLQSVGKEFFELPQEEKEVIAKCGGNNDSIEGYGTKLQKEVNGKKGWVDHLFHVVWPPSSINYRFWPKNPSSYSMSKGLGLEENKLQDDANGEEMQYLLKINYYPPCPLPDLVLGVPPHTDMSYLTILVPNEVQGLQVSRDGHWYDVKYVPNALVIHIGDQMEVLSNGKYKAVFHRTTVNKDKTRMSWPVFIEPKADHEVGPHPKFVSQDNPPKYKTKKYKDYAYCKLNKIPQ 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1593 318 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 159 315 - -
Aed3g1593 318 SUPERFAMILY Clavaminate synthase-like 16 316 - -
Aed3g1593 318 Pfam 2OG-Fe(II) oxygenase superfamily 184 279 IPR044861 -
Aed3g1593 318 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 159 315 - -
Aed3g1593 318 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 14 159 - -
Aed3g1593 318 Pfam non-haem dioxygenase in morphine synthesis N-terminal 45 153 IPR026992 -
Aed3g1593 318 Gene3D - 2 158 IPR027443 -
Aed3g1593 318 Gene3D - 159 316 IPR027443 -
Aed3g1593 318 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 14 159 - -
Aed3g1593 318 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 176 279 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1593 Aed-Chr3 20435868 20440383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1593 43 309 Glycosyltransferase AT5G59530 28.814 4.35e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1593 K05278 - gmx:778157 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1593 3 20435868 20440383 Aed3g1593 3 20435868 20440383 ECH