Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1591 ATGAGAGCCGCGGTTGAAGGATCCATGGTTGAGAGGTTTGACGACGGCGAAAAGGAGAAGAAGAAGAAGCGCCGATCCAATCGTCGATCCAAGCAAAACCCTCCCTCGTCTTCAGCATCTGAAGTGAATGAGGCCCAGGGGTTGTCACCAGATTCAGGGAAAATTGGAACACCTACGCATGCTTCTCCATCCTTGGTCAGTTCATTGAAGCAGGTCAACATGTGTTCTCCTAATGAGCAAGGATTATCCAAAGCATCAAATGTTGCTTTTATTTCGATGCCTCCCTTGCATATCAATGAACAAGTGGAACATGGTGATTTACGAATTGTGCCAATATATGGTGGAGGAATTGATCCAAAATCATTTTCTGTAATTAATGACAAGGACTCAGTACCTTGTGGTCAAATTGGGATTTGTGGCCAGAGAAATTATTTTAGTTCACACTGGTCTGTAGAGGCTGTTGAGAAGGCATTAGAGAAGGGCGACGTTTTTAAAGCTCTCTTTCGTGTCAATGCTCACAATAGACTCGAGGCATACTGCAAAATTGATGGAGTGACAACTGATGTTCTCATTGGTGGGATTCCAGCCCAGAATAGAGCTGTGGAAGGTGATATTGTTGCCATTAGGATTGATCCCTTGTCATTGTGGACAAAAATGAAAGGACCTAATGGATCTTGTAACAACACTGCAACACCAGAAGGTTGCAATCTTCTTACAGAAGATAATGAAGTGGGTGATAATATTTGTAAAGGGAAAGATAAAGTAGATGCTGATTATGAATCTGCCCATTACAGAGGCTCTCCTGGTCAAAACAAGGAGGATGCTGATCAAAACTCCTCCCATAGAAGTTATCCTTTTCCTGAAAAAAGAATTGTTTATGAGGATAATACCACCCGGGGTTCTACTAACCATTTAGATGTACAAGGAATGGCCAGCCGTGACAGCAATAATGGTCACCACTTTTCTGCTCCTGATTCCTTGAAGACCAATTCCTGTAGTGAACAGAGTGAAGTAGTTAATGCAGTGGAAAAGATGTGTTTGTTGGTTAACTCTTTCCCTTCTAAAAGACCAACTGGCAGGGTGGTTGCTATTATTGAGAGATCTCCACGTCGAGAGGGTATTGTTGGTCACCTTAATGTGAAACAGTGGGCTTCTTTCAGGGACATGAGCAAAAAGGATGTGAAGAAGAATAAGAATTTGATTTCTGAGCATGAATACATCCAACTGACACCAACTGATCCAAAGTTTCCAAATATGATGCTTCTTGTTAGAAAGTTACCCAAGTGCATTAAGAAAAGGCTGAAAAGTGGTGACGTGACAATTGAAATGGATCTGGTAGCTGCACAAATTGATGATTGGGTTGAAGAAAGTCATTTTCCTGAGGCCCACATTTTGCGTGTTTTTGGACGAGCGGGTGAAGTTCAGACCCATTTAGATGCAATTTTGTTTCAGAATGCAATCTGTTTGTCGGAATTTACAGCTGAAGCTCTGTCCTGTCTGCCATGTGTTCCTTGGGAGGTGCCACTTGAGGAAATTCAAAGTAGATTAGATCTTAGAAATTTGTGCATATTTACTATCGATCCTTCAACTGCTACTGATCTGGATGATGCACTGTCAATTGAGAAGTTGCCTAATGGAAATTATAGAGTAGGTATCCACATTGCTGATGTGTCATATTTTGTTTTACCTGACACAGCCTTGGAAAGTGAGGCCCGGTTTAGGTCAACAAGTGTCTATATGTCGCAAAGAAAGTTACCTATGTTGCCTGCATTATTGTCAGAGAATATTGGTTCACTTAGTCCTGGAGTGGATCGACTTGCAGTTTCCATCCTCCTGGATATAAGTCTTGCGGGGGATGTTGTAGACCGATGGATTGGTCGTACTGTCATACACTCTTGTTGTAAGCTTTCTTATGAACATGCTCAGGACATCATTGACAGGGCTTTTGATTTTGAAGGTTCAAATTTCATTGAAGATGGATATCCTAGAGTGTATGGCCATTTTGAATGGTCTGATGTTATTAAGTCTTTGAAAAGTCTTTATGAAATTTCGACTGACTTGAAACAGAAGAGATTTACTGATGGGGCTCTACGGCTTGAAAACCCAAAAGTTGTTATCTTGTTTGATGAAAATGGAGTTCCTTACGATAGTATGCTTTCTGAAAGGAAAGAATCAAATTTTCTTGTTGAGGAATATATGCTTTTGGCCAATAGAATTGTAGCTGAAGTCATATGTAGAGCTTATCCTGATGGTGCATTGTTGAGGAGGCATCCTGAACCTAATATGCGGAAGCTGAGGGAATTTATGGCATTTTGTCAGAAACATGGTTTAGAATTGAACACGTCTTCATCTGGTCAGTTCCATTGCTCGTTGGAGCAGATCAGGGAAAAGCTCAAGGGTGATCCTTTGCTTTACAATATACTTATTTCTTTTGCTACAAGGCCAATGCAGTTGGCATCTTACTTCTGCAGTGGAGATTTGAAGGACAGTGAAAGTGAATGGGGTCATTATGCTTTGGCTGTCCCATTTTACACTCATTTTACATCACCCTTGCGTCGGTATCCAGATATTATTGTTCACCGGACACTGCTTGCTACTATAGAGGCTGAGGAATTATATATGAAGCATCAGAAGTCTTTGCAGGGTTACAAGGATGTGAAAGTGCAAAAAAGATGTTTCACAGGCACTAATTTTGATAGAAGTGCTGCAGAATCCATGGAAGGTAGGGAAGCCTTATCAGCTGCAGCTGTGAAGCATAGTGTTCCAGGTGCTGAAACACTTGCAGATATTGCTGTTTATTGCAATGAAAGAAAGCTAGCTAGCAGAAATGTTAAGGATTCCTGTGATAAACTTTACATATGGTTTCTTCTGAAGAAAAAGGAGGTTTTGTTGTCAGAAGCAAGAATACTGGGACTAGGCCCAAGATTCATGTCAATTTATATTCAAAAGCTAGCTATTGAGCGACGCATATATTATGATGAAGTTGAAGGCTTGACTGTGGAGTGGCTTGAGACGACATCCACTTTGGTGCTTAGCATGTCTACTAATAAGTCTGCATTTAGGAGGGGCTACCCTAACAAGTGGAGGGCACTTGAAGAAGTTGCATTGCTTACTTGTCCATGTAACCTGGATGTTACCATGGATAATTCTAACCAGAGTGATGTAATTAAAGTGGATGATAGTATATCTGCCATGGGCAGGGAGCCCATTTCAAGATCAGACACATCAGAAACTGAAATTGACCCTGCATTTTTCCCACTCACAGTGCGTGTTCTTTCAACAATTCCAGTTGCACTTCATGCTGTTGGTGGTGATGATGGGCCCCTTGATATTGGAGTGAGGCTGTACATGAGCTCCTATTTTGGTTGA 3369 0.4135 MRAAVEGSMVERFDDGEKEKKKKRRSNRRSKQNPPSSSASEVNEAQGLSPDSGKIGTPTHASPSLVSSLKQVNMCSPNEQGLSKASNVAFISMPPLHINEQVEHGDLRIVPIYGGGIDPKSFSVINDKDSVPCGQIGICGQRNYFSSHWSVEAVEKALEKGDVFKALFRVNAHNRLEAYCKIDGVTTDVLIGGIPAQNRAVEGDIVAIRIDPLSLWTKMKGPNGSCNNTATPEGCNLLTEDNEVGDNICKGKDKVDADYESAHYRGSPGQNKEDADQNSSHRSYPFPEKRIVYEDNTTRGSTNHLDVQGMASRDSNNGHHFSAPDSLKTNSCSEQSEVVNAVEKMCLLVNSFPSKRPTGRVVAIIERSPRREGIVGHLNVKQWASFRDMSKKDVKKNKNLISEHEYIQLTPTDPKFPNMMLLVRKLPKCIKKRLKSGDVTIEMDLVAAQIDDWVEESHFPEAHILRVFGRAGEVQTHLDAILFQNAICLSEFTAEALSCLPCVPWEVPLEEIQSRLDLRNLCIFTIDPSTATDLDDALSIEKLPNGNYRVGIHIADVSYFVLPDTALESEARFRSTSVYMSQRKLPMLPALLSENIGSLSPGVDRLAVSILLDISLAGDVVDRWIGRTVIHSCCKLSYEHAQDIIDRAFDFEGSNFIEDGYPRVYGHFEWSDVIKSLKSLYEISTDLKQKRFTDGALRLENPKVVILFDENGVPYDSMLSERKESNFLVEEYMLLANRIVAEVICRAYPDGALLRRHPEPNMRKLREFMAFCQKHGLELNTSSSGQFHCSLEQIREKLKGDPLLYNILISFATRPMQLASYFCSGDLKDSESEWGHYALAVPFYTHFTSPLRRYPDIIVHRTLLATIEAEELYMKHQKSLQGYKDVKVQKRCFTGTNFDRSAAESMEGREALSAAAVKHSVPGAETLADIAVYCNERKLASRNVKDSCDKLYIWFLLKKKEVLLSEARILGLGPRFMSIYIQKLAIERRIYYDEVEGLTVEWLETTSTLVLSMSTNKSAFRRGYPNKWRALEEVALLTCPCNLDVTMDNSNQSDVIKVDDSISAMGREPISRSDTSETEIDPAFFPLTVRVLSTIPVALHAVGGDDGPLDIGVRLYMSSYFG 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1591 1122 Pfam RNB domain 515 867 IPR001900 GO:0003723|GO:0004540
Aed3g1591 1122 SUPERFAMILY Nucleic acid-binding proteins 358 487 IPR012340 -
Aed3g1591 1122 Gene3D - 139 233 - -
Aed3g1591 1122 MobiDBLite consensus disorder prediction 261 279 - -
Aed3g1591 1122 PANTHER DIS3-LIKE EXONUCLEASE 2 22 1120 - -
Aed3g1591 1122 Gene3D - 386 473 - -
Aed3g1591 1122 SUPERFAMILY Nucleic acid-binding proteins 475 959 IPR012340 -
Aed3g1591 1122 ProSitePatterns Ribonuclease II family signature. 836 860 IPR022966 -
Aed3g1591 1122 MobiDBLite consensus disorder prediction 7 21 - -
Aed3g1591 1122 MobiDBLite consensus disorder prediction 1 63 - -
Aed3g1591 1122 Pfam Dis3-like cold-shock domain 2 (CSD2) 406 485 IPR041505 -
Aed3g1591 1122 SUPERFAMILY Nucleic acid-binding proteins 143 367 IPR012340 -
Aed3g1591 1122 Hamap DIS3-like exonuclease 2 [DIS3L2]. 18 1097 IPR028591 GO:0000175|GO:0034427
Aed3g1591 1122 PANTHER RIBONUCLEASE 22 1120 - -
Aed3g1591 1122 MobiDBLite consensus disorder prediction 31 63 - -
Aed3g1591 1122 MobiDBLite consensus disorder prediction 296 329 - -
Aed3g1591 1122 MobiDBLite consensus disorder prediction 261 329 - -
Aed3g1591 1122 SMART RNB_2 515 869 IPR001900 GO:0003723|GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1591 Aed-Chr3 20420120 20426995 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1591 K18758 - gmx:100817387 1986.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1591 3 20420120 20426995 Aed3g1591 3 20420120 20426995 ECH