Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1583 AATATCCCCACTTTACTTCAAGCTGCTGTAATCGGGATCTTCCAGAGGGTTTTTCAGTGGAACCGTACCACACCACCTGAGTTGACTTACTTGCTTTGCCCTCCCATGTCCATGGCAACTCCACACTCCCATTTTCGTATCATAGTTTTCTCACTCACTCTCCTTCTTTCCACAACTCAACAACAACTTCTTCAAGAAGAAGACACTCCCATCACGCGCTTCCAGCAATACCTCCGAATCAACACGGCCCACCCAAGCCCAGACTACGCCTCCGCGGTCGCCTTCCTCAAAGCCCAGGCCCACTCCCTGGGCCTCAAAGCCCAAACCCTCGAGTTCGTCCAAGGCAAGCCCCTCCTCATCCTCACATGGCCCGGCTCCAACCCCTCTCTCCCCTCCATCCTCCTCAACTCCCACCTCGACTCCGTCCCCGCCGAGCCGGACAAGTGGCTCCACCCTCCCTTCTCCGCCCACCGCGCCCCCTCCGGCGCCATCTTCGCCCGCGGCGCCCAGGACGACAAATGCATCGCCGTACAATACCTCGAGGCCATCCGCAGCCTCAAATCACAATCCTTCGCCCCCCTCCGCACCATCCACATCACCCTCGTCCCCGACGAGGAAATCGGCGGCTTCGACGGGGCCTTCAAGTTTGTGGAATCCGAGGACTTTGACAGACTCAACGTCGGATTCGCGCTCGACGAGGGGCAGGCCTCGCCAGGCGACGAGTTTAGGGTTTTCTACTCCGATAGGGTGCCGTGGAACGTGAAGATCACGGCGAGGGGGCGGCCCGGGCACGGGTCGAGGATGTACGACGGGAGCGCGGTGGAGAATTTGATGGAGAGCATGGAGGTTGTTAGTAGGTTCAGGGAGAGCCAGTTCGATGTGGTGAAGGCCGGGAAAGCGTTGAATGCTGAGGTTGTGTCGGTCAATCCGGTTTACTTCAAAGCTGGGGTTGCTTCTCAAGATCCTTCGGAGGCGGATGTTGGGTTTGATCTGAGGCTAACACCAACGACTGACGCAGAGGAAATGAGGAGGAGAATTGCGACAGAATGGGCGCCAGCTGTTAGGAATATGTCATACGAGATTATAGAGAAAGGACCCCTTAGAGACTACATGGGACGCCCGTTGATGACCGCAACTAATGATTCTAATCCATGGTGGTCAGTTTTCAAGCAAGCCATCACATCTGTTGGAGAAAAACTCTCAAGGCCTGAAATTCTTGCATCCACAACTGATGCTCGGTACCTCAGACAGAAAGGGATTCCCGTGCTCGGTTTCTCCCCAATGAAAAATACTCCCATCCTACTTCATGACCACAACGAGCACTTAAAAGATACTGTGTTCATGAAGGGAATTCAGGTATACGAGTCTCTGATAAGTTCCTTGAGTACTTTCACAGAAGCTTCACATTAA 1410 0.5447 NIPTLLQAAVIGIFQRVFQWNRTTPPELTYLLCPPMSMATPHSHFRIIVFSLTLLLSTTQQQLLQEEDTPITRFQQYLRINTAHPSPDYASAVAFLKAQAHSLGLKAQTLEFVQGKPLLILTWPGSNPSLPSILLNSHLDSVPAEPDKWLHPPFSAHRAPSGAIFARGAQDDKCIAVQYLEAIRSLKSQSFAPLRTIHITLVPDEEIGGFDGAFKFVESEDFDRLNVGFALDEGQASPGDEFRVFYSDRVPWNVKITARGRPGHGSRMYDGSAVENLMESMEVVSRFRESQFDVVKAGKALNAEVVSVNPVYFKAGVASQDPSEADVGFDLRLTPTTDAEEMRRRIATEWAPAVRNMSYEIIEKGPLRDYMGRPLMTATNDSNPWWSVFKQAITSVGEKLSRPEILASTTDARYLRQKGIPVLGFSPMKNTPILLHDHNEHLKDTVFMKGIQVYESLISSLSTFTEASH 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1583 469 Pfam Peptidase family M20/M25/M40 134 459 IPR002933 GO:0016787
Aed3g1583 469 SUPERFAMILY Bacterial exopeptidase dimerisation domain 252 357 IPR036264 -
Aed3g1583 469 PIRSF ACY-1 60 466 - -
Aed3g1583 469 Gene3D - 254 354 - -
Aed3g1583 469 SUPERFAMILY Zn-dependent exopeptidases 68 462 - -
Aed3g1583 469 CDD M20_AcylaseI_like 67 462 - -
Aed3g1583 469 PANTHER PUTATIVE-RELATED 54 467 - -
Aed3g1583 469 Pfam Peptidase dimerisation domain 252 348 IPR011650 -
Aed3g1583 469 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 65 463 IPR010159 GO:0004046|GO:0005737|GO:0006520
Aed3g1583 469 Gene3D - 383 463 - -
Aed3g1583 469 Gene3D Zn peptidases 61 253 - -
Aed3g1583 469 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 169 208 IPR001261 -
Aed3g1583 469 PANTHER AMINOACYLASE-1 54 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1583 Aed-Chr3 20299299 20305810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1583 K14677 - gmx:100817383 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1583 3 20299299 20305810 Aed3g1583 3 20299299 20305810 ECH