Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1568 ATGGAAGAAGGACTTATTTGCCAATGGAGCATGTTTAGATCTCTCTTAGCAATTCTTCAGTGGTGGGCCTTCAATGTCACTGTCATTATCATCAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTTCCATTGTCAGTATCCTGCATCCATTTCATCTGCTCAGCCATTGGAGGATATGTGGTGATTAAGGTGTTGAAGCTTAAACCGCTGATAACTGTTGACCCTGAAGACCGCTGGAGAAGAATCTTTCCTATGTCATTTGTGTTCTGCATTAACATTGTGCTGGGGAATGTGAGCCTGCGATACATACCAGTTTCTTTTATGCAGACGATAAAATCATTCACCCCTGCAACAACAGTTATATTGCAATGGCTAGTGTGGAGGAAATATTTTGATTGGCGCATTTGGGCTTCTCTTATACCAATTGTTGGAGGGATTCTTCTCACGTCTATTACCGAGCTTAGCTTTAATGTATTTGGGTTTTGTGCTGCCTTATTTGGCTGTTTGGCTACATCTACAAAGACTATCCTTGCAGAGTCTCTGTTGCATGGATACAAATTTGACAGCATAAACACCGTTTATTACATGGCTCCTTTTGCAACCATGATCTTGGCAATACCGGCTATGCTACTTGAAGGCAATGGAGTTCTTGAGTGGCTAAGTACTCATCCATATCCTTGGTCGGCCCTGATCATTATTTTCAGCTCCGGAGTTTTGGCGTTCTGTCTTAACTTCTCCATTTTTTATGTGATTCATTCCACCACTGCTGTAACATTTAATGTTGCTGGAAACCTCAAGGTTGCTTTTGCTGTGCTTGTTTCTTGGCTAATTTTTAGGAATCCAATATCATATTTAAATTCAGTTGGATGTGCTGTGACTCTTGTTGGATGTACATTCTATGGTTATGTGAGGCATTTGCTCTCCCAACAGCCATCAGCTCCAGGAACTCCTCGGACACCAAGGACTCCTAGGAGTAAGATGGAGTTGCTTCCACTTGTAAATGACAAATTAGATGATAAGGTCTAA 1029 0.413 MEEGLICQWSMFRSLLAILQWWAFNVTVIIINKWIFQKLDFKFPLSVSCIHFICSAIGGYVVIKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWRKYFDWRIWASLIPIVGGILLTSITELSFNVFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILAIPAMLLEGNGVLEWLSTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAFAVLVSWLIFRNPISYLNSVGCAVTLVGCTFYGYVRHLLSQQPSAPGTPRTPRTPRSKMELLPLVNDKLDDKV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1568 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 300 - -
Aed3g1568 342 Gene3D - 65 157 - -
Aed3g1568 342 PANTHER GDP-MANNOSE TRANSPORTER GONST5 1 328 - -
Aed3g1568 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 152 - -
Aed3g1568 342 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Aed3g1568 342 PANTHER SOLUTE CARRIER FAMILY 35 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1568 Aed-Chr3 20128722 20133022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1568 1 342 Organic Solute Cotransporters AT1G77610 88.630 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1568 K15285 - gmx:100817042 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1568 3 20128722 20133022 Aed3g1568 3 20128722 20133022 ECH