Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1567 ATGGACGAGTCCTCGCTGCAACTCGTCTCCGAAATCGGACGAGTCCTCGCTCACCGAACTCGTCCCAAGAAAGACTTCTTAGTCAAATCCCTCGGAAAAGCTGCAAATGCTTTGGCTCTGATAAAACAGTCTCCTCAACCAAGAACAGCCAAAGAAGTACAAGCTGCTAAGAAACAAGAAGATGCTTTAAAGCCCCTGGCAAATGCCGTGGTTTGTGGTGGTCTGCTTCAACATGCAGATAAGGAAGTTAGGCTTCTGGTTGCCATGTGTGTCACTGACCTTTTTAGAATCATGGCACCTGTACCGCCTTTTGAAGACAGGCATTTGAGGGATGTATTTAAACTTATCATTAGTTTGTTTGAGGATCTAGCTGATACCGCAAGTCCATTATTTTCAAAAAGGGTTAAAGTATTAGAGACAATGGCTCAATTAAAGTGTTGTGTGATAATGCTGGAGATTGACTGCCTAGACCTGGTTCTTGAGATGTTCAATATTTTCTTCTCAGTAGTGAGAGATGAACACCTTTTGATTAGTCCCATGACTTCTATAATGATAAACATTTTGAACGAGAGTGAGGAGGCTTTTCAGCAACTATTGGAAGTGATTTTACAAAATCTTATAAAGCAAAAAAAAGATGCAATTTTTGCTGCTGACAAACTTGCTGCATCAGTCATTAAAACTTGTGCGCAAGAGGAAGAGCTGAACCCCCTAGTTTGTGGGTTTTTAACAACTTGTATACACGACAGAGATGCTATGGGTAGTGAGCTTAAAGAGTATTACTATGAAATATTCTCTAAAGTTTTCCAGTGTACACCTCAGATGCTTCTTGCTGTCATCCCAAGCTTAATTCAAGAATTATCGGCTGATGAGGTTGATGTTCGGATAAAAGCTGTAAATTTGGTGGGGAAGCTTTTTGCACTTCAACATCATGTTGCTCGCAAGTATCATGATCTTTTTGTGGAGTTTTTGAAAAGATTTTCTGATAAATCTGTGGATGTTAGGATTAGTGCTCTACAATGTGCTAAAACTTTTTATTTAGCCAATCCCTATGATGGAAAGAGTGCTGTGCAAAAGTTGATAAAGGTATACCGAGATTACTGCAAGAAATGTTCTGAAGGTAGCATGACAATTAGTCATCACTTCGAAGAGATTCCATGTAAAATTATGATGCTGTGTTATGATAAAGATTGTAAGGAGTTCAGGTTCCAGAACATGGAATTTGTTCTTGCTAATGATCTATTTCCTGGGGATCTTTCAGTCAAGGAAAGAACAAAACATTGGATACACATGTTTTCTCTTTTCAGTTTTCCTCATGAAAAGGCACTGGATACTATTTTGACTCAAAAGAGAAGGTTCCAAAATGAAATGAAAAGCTTTTTGGCTATGCGGAAGAAATTAAAGGAAATTTCTCCAGAAGAAACGCAGAAGAAGATTGAAATTATGTTTACAAAAATGGCAGCTTTCTTCCCGGATTCTCAAAAAGCTGAAGAGTGTCTGCATAAGTTAAATCTAATTAAAGATAATAGCGTGTTTAAATTACTTGAAAAATTGTTGGAGGAACAAGCCTTCACCACAACTGGACAAACTATGAAAGATAAAAATCTGGTAATGATTGGAGACAGCAATCCAAATTATGAGTTTTTACGTCCACTCTTCTCCAAATGTTCATCCAACATTTTCAGCTCAGAGCATGTCAAATGTATCTTAGATTATCTTTCCAATAATGAAAATGAAAATAAGGATTTGGAGGATTCTTCTGCAAATCTTCTGCTGGCTATTGTTCGAAATTTCCCCTCTATGTTGAAAGGCTTGGAAAAGCAGTTCCAAAAGTTGTTGGAACAGAAAATTCCTGTTAATGACAAGCTGATTGAGGTCATAGCAAAGGCAGGCTCTCACACCTCTTTCAATCATAGTGATATCTATCCATTTCTAAAGAGAATTTGCTTGGATGGAACTCGCAGACAGGCCAAATTTGCGGCATCTGCAATTGCTGCTTTAAGTTCTGAACAATCACTTTTCAGAAAGTTATATGAGGAGCTAGTTGATTCTTTATATAGTGAGCGGAATGTCCCTACTATTTTGCAATCTCTGGGATGCATTGTGGAGTACTCTGTTTCAAATTTTGAAACTCAAGTTGAAGAGATCACATCATATATATGCCAGAAAATCATTCAAATGGAGCATTTGGATGATGGCCATGATGCGACATCCTTTCATGATACTTCTCAATGTAGCGAATCTTTTCAATTGAAGGACTCTTCTTTCTTTGTTAGGAGCACATTTCTTAGTAAGATACAAAAGTTGTTGAAAGAGCATAAACTACCTATCAGATTTGCTTGTGCTTTTGCTTTGGCAGTAACAGATAGCATTGACAAAATGCAATATCAGAACTATAAATATATGACAGAGTTTATAAAGGATTACAGTATAGTAGCTCGGACACGTCAAACTTCTGCTGTTCAAGGAGCCATCATTGATTACCCTGCCTACATTTTGGTCTTCCTGATTCATGTTCTTGCTTGGAATAATGACTTTCCATTTGAAGTCTCTCAAGATGAAAAAATGTATGCTGACCTTTGCAGTCCACTTTTCTTTATCCTGCAGGCATTAGTTGACACCAGTATTGTTGATGGTGACTTGGACATTGTTAATGGTGCTGTCCTACATATAGTTAGTATTTTTCGAGCAATCAGAAAGGTTGAGGATGCTGTTGATGCGCAGATGACACCTAAGCTGCATATGCTGGCTGAAATTGGGATATTTGCTTTAAATGAATTAAATCGTGGTTCAGTATTGCAAACACCTGGACAAATTTTATTGCCTTCGTCACTATATAGAGTGAATCTTGTTAAGAACGATACTAGTTCAAAACGTCTGGAATCCTTTTTTGATGAAAATTTTCTAAGTAGAGTTTTCCATGCACTTAAGGAATCTACTCTGCCTCGTGGATATGCTCAAAAGGATGTTAAAAAGTCTAATATTTCTGGTGTACCGGATTTGGCATCTAGCAAACCGGGTGATTTGTCAAGGAGAGAAATAACAAATGCTAAAACTGTGAAGCTAAACATCCCTTCGTTGAAAAGGAGAAAATGTGTGCCTATGTCTGGTTCTGGATCGGTTGGTTTGCATGAATGCTCTATGATTGGGAAGCAACAAAAAATAGCACCAAAACATTGTGGAAAGACAATAGAGAGAAACATGCTTTCATCAAGTGATTCTGTGTGCTCTAAGGGTTCTCTGTCTGAATCACATGGGCCAACCCAAAAATCAAAAAGAGCTGCTGCTTGTTCGTTGGAGAATGTTGATACCAGTAGCAAACATACTGTTGAACCCTTCAAATGTCCTAGAACGAAACGGAATGATAAGTGTGGCTCAAAGGTTAGAAGAACAAGACAGAGAGTATAA 3405 0.3794 MDESSLQLVSEIGRVLAHRTRPKKDFLVKSLGKAANALALIKQSPQPRTAKEVQAAKKQEDALKPLANAVVCGGLLQHADKEVRLLVAMCVTDLFRIMAPVPPFEDRHLRDVFKLIISLFEDLADTASPLFSKRVKVLETMAQLKCCVIMLEIDCLDLVLEMFNIFFSVVRDEHLLISPMTSIMINILNESEEAFQQLLEVILQNLIKQKKDAIFAADKLAASVIKTCAQEEELNPLVCGFLTTCIHDRDAMGSELKEYYYEIFSKVFQCTPQMLLAVIPSLIQELSADEVDVRIKAVNLVGKLFALQHHVARKYHDLFVEFLKRFSDKSVDVRISALQCAKTFYLANPYDGKSAVQKLIKVYRDYCKKCSEGSMTISHHFEEIPCKIMMLCYDKDCKEFRFQNMEFVLANDLFPGDLSVKERTKHWIHMFSLFSFPHEKALDTILTQKRRFQNEMKSFLAMRKKLKEISPEETQKKIEIMFTKMAAFFPDSQKAEECLHKLNLIKDNSVFKLLEKLLEEQAFTTTGQTMKDKNLVMIGDSNPNYEFLRPLFSKCSSNIFSSEHVKCILDYLSNNENENKDLEDSSANLLLAIVRNFPSMLKGLEKQFQKLLEQKIPVNDKLIEVIAKAGSHTSFNHSDIYPFLKRICLDGTRRQAKFAASAIAALSSEQSLFRKLYEELVDSLYSERNVPTILQSLGCIVEYSVSNFETQVEEITSYICQKIIQMEHLDDGHDATSFHDTSQCSESFQLKDSSFFVRSTFLSKIQKLLKEHKLPIRFACAFALAVTDSIDKMQYQNYKYMTEFIKDYSIVARTRQTSAVQGAIIDYPAYILVFLIHVLAWNNDFPFEVSQDEKMYADLCSPLFFILQALVDTSIVDGDLDIVNGAVLHIVSIFRAIRKVEDAVDAQMTPKLHMLAEIGIFALNELNRGSVLQTPGQILLPSSLYRVNLVKNDTSSKRLESFFDENFLSRVFHALKESTLPRGYAQKDVKKSNISGVPDLASSKPGDLSRREITNAKTVKLNIPSLKRRKCVPMSGSGSVGLHECSMIGKQQKIAPKHCGKTIERNMLSSSDSVCSKGSLSESHGPTQKSKRAAACSLENVDTSSKHTVEPFKCPRTKRNDKCGSKVRRTRQRV 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1567 1134 MobiDBLite consensus disorder prediction 1108 1134 - -
Aed3g1567 1134 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 3 354 IPR039776 GO:0007064
Aed3g1567 1134 Gene3D - 186 379 IPR011989 -
Aed3g1567 1134 SUPERFAMILY ARM repeat 75 794 IPR016024 -
Aed3g1567 1134 PANTHER PRECOCIOUS DISSOCIATION OF SISTERS 5, ISOFORM A 3 354 - -
Aed3g1567 1134 PANTHER PRECOCIOUS DISSOCIATION OF SISTERS 5, ISOFORM A 353 1111 - -
Aed3g1567 1134 Pfam Sister chromatid cohesion protein PDS5 protein 353 751 - -
Aed3g1567 1134 Pfam Sister chromatid cohesion protein PDS5 protein 25 350 - -
Aed3g1567 1134 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 353 1111 IPR039776 GO:0007064
Aed3g1567 1134 MobiDBLite consensus disorder prediction 1071 1094 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1567 Aed-Chr3 20106066 20124133 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1567 K11267 - gmx:100777822 1231.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1567 3 20106066 20124133 Aed3g1567 3 20106066 20124133 ECH