Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1565 ATGACCCCAAACCAACTCTCAAAAACTTCCAAACAAAAATTAAAAAGAAAAGAAACTTTGACAAACACAAAAAAAAATTTGACTGAGGACAAAACAAACAAAACTGAAAGGCGCTTGAGCGTTGAGCCAAGCAAGAAAGACCAAGCCGAAGTTGGGGAACTCGTTTCACAGCTGAAACTCCAACGACCACCATCGTTCTCTTCTCCCCAACACCCTTTTTTCTATTTAAACCCCCTCTCACACTCCCCACACCCCCCACACCACACCATGAGTCCCTACATTTTCGGCGTCGTAGTCCCTCTCCTCGTCACGCTCATCCTCCGCAACAACTCCAAAAACCCGAAACGCGGCGTTCCGGTCGAGGTCGGGGGCGAGGAGCCCGGTCTGGCAATCCGGAACCGCCGGTTCGAGTCGCCGGTCCAGAGCGCGTGGGAGGGCGTCGCCACGCTCGCGGAGCTCTTCGAGGAGGCATGCAAGGTGCACGCGCAGAGGCTTTTCCTCGGCACGCGCGATGTGCTTTCGAGGGAACTGGAGACCGGCCCCGACGGCAGGTCGTTCGAGAAGCTTCACTTGGGAGACTACGCCTGGCTCTCGTACGACAGAGTGTTTGATGCCGTTTCGGGGTTCGCGTCGGGGTTGGCTTACATCGGCCATGTCAGGGAGGAGCGCGCTGCGATCTTCGCCGACACGCGCCAAGAGTGGTTCATGGCGCTCCAGGGTTGTTTCAGACGTAATGTGACAGTTGTGACTATATATGCATCATTGGGAGAGGAAGCTTTATGTTACTCATTGAATGAGACAGAGGTTACAACAGTGATTTGTGGGACAAAAGAATTGAGAACACTTGTAAACATTAGTGGACAACTAGACTCAGTGAAACGTGTGATATGCATGGATGATGATATCCCATCTGATGCCTCTGCTATTGCATATGACTGGACAATCACTTCCTTTGCTGAGGTTGAGAGACTTGGTAGAGAAAATCCTGTTGATGCTGATTTACCTCTTTCAGCAGATGTTGCAGTTATAATGTATACGAGTGGAAGTACAGGATTACCTAAGGGTGTGATGATGACCCATGGCAATGTCTTAGCTACACTCTCTGCTGTGATGACAATTGTTCCTGACATTGGGACAAAGGATATATATCTTGCATACTTACCAATGGCTCATATCTTAGAATTAGCAGCTGAGAATTTGATGGCTGCAGTTGGAGTTCCTATAGGATTTGGTTCTCCTTTGACCCTTACTGATACTTCAAACAAGATTAAAAAAGGAACAAAAGGGGATGCTACTGCACTGAGCCCAACTTTAATGGCAGCTGTACCAGCAATTCTTGATCGTGTTCGTGATGGAGTGTTCAAGAAGTTGTTTCATTTAGCCTATGCGCGGAGGTTGCAAGCAGTTAATGGTAGTTGGTTAGGAGCTTGGGGCTTGGAAAAGGCTCTTTGGGATTTTCTTGTGTTCAGAAAGGTCCGAGCAATTCTGGGTGGTCGTATCCGGTTTATACTGTCTGGTGGTGCTCCCCTTTCTGGTGATACCCAGAAGTTCATCAATATTTGTCTTGGTGCTCCAATCGGTCAAGGATATGGTCTTACCGAGACTTGTGCTGGTGGGACATTCTCTGATGTTGATGACACATCTGTTGGCCGCGTTGGACCACCTCTTCCATGCTCATTTATTAAGCTAATAGACTGGCCTGAAGGTGGATATTTAATCAATGACTCTCCAATGCCCCGTGGTGAAATTGTAATTGGTGGTCCAAATGTCACTCTCGGGTATTTCAAAAATGAAGAAAAAACAAAAGAATCATACAAGGTTGATGAAAGAGGAATGAGGTGGTTTTACACTGGTGACATTGGGAGAGTTCATACAGATGGATGCCTTGAAATCATTGATCGTAAAAAGGACATTGTTAAACTGCAGCATGGAGAATATGTCTCCTTGGGAAAGGTTGAGGCAGCTCTTATTGTTAGCCCCTTCGTGGACAATATTATGGTTCATGCTGATCCTTTCCATAGTTACTGTGTGGCACTTGTGGTGGGTTCTCAGTCTACATTGGAAGAATGGGCTTCAGAAAAAGGAATTTCTTCTTCCAATTTTTCAGAACTTTGCACGAAAGAAGAAACTCTAAAGGAGGTGCATGCATCACTTGTAAAGGAAGGAAAGAAGGCTCGTTTGGAGAAATTTGAGATTCCTGCAAAAATTAAATTGCTTTCTGACCCTTGGACTCCTGAGTCTGGCCTAGTCACTGCTGCTCTCAAACTCAAGAGAGAGAACATAAAAAAGACTTTTGATGAAGACCTTTCGGAGTTGTATGCTTAA 2325 0.4632 MTPNQLSKTSKQKLKRKETLTNTKKNLTEDKTNKTERRLSVEPSKKDQAEVGELVSQLKLQRPPSFSSPQHPFFYLNPLSHSPHPPHHTMSPYIFGVVVPLLVTLILRNNSKNPKRGVPVEVGGEEPGLAIRNRRFESPVQSAWEGVATLAELFEEACKVHAQRLFLGTRDVLSRELETGPDGRSFEKLHLGDYAWLSYDRVFDAVSGFASGLAYIGHVREERAAIFADTRQEWFMALQGCFRRNVTVVTIYASLGEEALCYSLNETEVTTVICGTKELRTLVNISGQLDSVKRVICMDDDIPSDASAIAYDWTITSFAEVERLGRENPVDADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATLSAVMTIVPDIGTKDIYLAYLPMAHILELAAENLMAAVGVPIGFGSPLTLTDTSNKIKKGTKGDATALSPTLMAAVPAILDRVRDGVFKKLFHLAYARRLQAVNGSWLGAWGLEKALWDFLVFRKVRAILGGRIRFILSGGAPLSGDTQKFINICLGAPIGQGYGLTETCAGGTFSDVDDTSVGRVGPPLPCSFIKLIDWPEGGYLINDSPMPRGEIVIGGPNVTLGYFKNEEKTKESYKVDERGMRWFYTGDIGRVHTDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPFVDNIMVHADPFHSYCVALVVGSQSTLEEWASEKGISSSNFSELCTKEETLKEVHASLVKEGKKARLEKFEIPAKIKLLSDPWTPESGLVTAALKLKRENIKKTFDEDLSELYA 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1565 774 Coils Coil 17 37 - -
Aed3g1565 774 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 101 773 - -
Aed3g1565 774 ProSitePatterns Putative AMP-binding domain signature. 343 354 IPR020845 -
Aed3g1565 774 SUPERFAMILY Acetyl-CoA synthetase-like 146 772 - -
Aed3g1565 774 MobiDBLite consensus disorder prediction 1 48 - -
Aed3g1565 774 MobiDBLite consensus disorder prediction 11 48 - -
Aed3g1565 774 Gene3D - 138 634 IPR042099 -
Aed3g1565 774 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 101 773 - -
Aed3g1565 774 Pfam AMP-binding enzyme 192 642 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1565 Aed-Chr3 20082090 20092164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1565 238 774 Acyl Lipid Metabolism Gene Families AT1G77590 77.879 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1565 K01897 - gmx:100803677 1268.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1565 3 20082090 20092164 Aed3g1565 3 20082090 20092164 ECH