Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1527 ATGACTGAAAACGGTATCAAAGAGACAACGTCGACATTTGAAGTCTCCAATGACCACATGCATCAGCAAGTAGATTCCTCGAGATTTGATGATGATGGCCGTCCCAAAAGAACTGGATCTATGTGGACTTCAAGTGCTCACATAGTAACAGCTGTTATTGGTTCCGGGGTGCTATCTTTGGCTTGGGCTATTGCTCAGCTTGGTTGGGCTGCTGGTCCTGTGGTGATGATTCTCTTTTCTATTGTGACTTACTACACCTCAGCTCTTCTAGCTTGTTGCTACCGTTATGGTGACCCACTCACTGGCAAGAGAAACTACACTTACACACAAGCTGTTAGATCCTATCTTGCTTCCATAAGCATGATGGCAATCAAAAGGTCTAATTGTTATCATGCAAGTGGAGGGAAAAATCCATGCAAAATGAATAGCAATTGGTATATGATTTCATTTGGTATTGTGGAAATCATCTTCTCACAAATTCCAGATTTCCATGAGTTGTGGTGGCTCTCTATTGTTGCTGCTGTCATGTCCTTCACATACTCATTCATTGGACTTGGCCTTGGTATTGGTAAAGTTATAGGAAATGGAAGCATTAAAGGAAGCATAACGGGTGTAAAAATTGGGCCTGTGACAGAATCCCAAAAAATTTGGAGGAGCTTCCAAGCTCTTGGTAACATAGCCTTTGCCTACTCCTACTCAATGATCCTCATTGAAATTCAGGACACAGTGAAATCCCCACCAGAAGAGTCAAAGACAATGACAAAAGCCACACTAATCAGTGTCATAATCACAACAGTATTCTACTTGCTATGTGGCTGCTTTGGCTATGCTTCATTTGGGGATGCAAGCCCAGGGAACCTCCTCACAGGCTTTGGCTTCTACAACCCCTATTGGCTAATTGACATAGCCAATGTTGCAATTGTTATCCACCTTGTTGGTGCATACCAAGTCTATTGTCAACCCCTCTTCTCATTCATTGAGTCGCATGCAGTAGAAAAGTTCCCAAACAGTGACTTCATGACAAAAGAGTTCCAAGTGCCAATCCCAGGCTTCAAGCCCTACAGGCTCAACCTCTTCAGGATGGTTTGGAGGACCATTTTTGTTGTGGTTTCAACTGTTATTGCAATGCTGCTTCCATTCTTCAATGACATTGTGGGGCTCATTGGTGCCGTTGGGTTTTGGCCTCTCACTGTGTATTTTCCTGTGGAGATGTATATTACTCAGAGTAAGATACCCAAGTGGGGGATGAAGTGGATTTCCCTGCAGATGCTTAGTGCTGCTTGCTGTGTGGTTACTCTTGTGGCTGCTGCTGGCTCCATTGCTGGGGTTATTGATGATCTTAAGGTTTACAAGCCGTTTGTCACCACCTACTAG 1374 0.4381 MTENGIKETTSTFEVSNDHMHQQVDSSRFDDDGRPKRTGSMWTSSAHIVTAVIGSGVLSLAWAIAQLGWAAGPVVMILFSIVTYYTSALLACCYRYGDPLTGKRNYTYTQAVRSYLASISMMAIKRSNCYHASGGKNPCKMNSNWYMISFGIVEIIFSQIPDFHELWWLSIVAAVMSFTYSFIGLGLGIGKVIGNGSIKGSITGVKIGPVTESQKIWRSFQALGNIAFAYSYSMILIEIQDTVKSPPEESKTMTKATLISVIITTVFYLLCGCFGYASFGDASPGNLLTGFGFYNPYWLIDIANVAIVIHLVGAYQVYCQPLFSFIESHAVEKFPNSDFMTKEFQVPIPGFKPYRLNLFRMVWRTIFVVVSTVIAMLLPFFNDIVGLIGAVGFWPLTVYFPVEMYITQSKIPKWGMKWISLQMLSAACCVVTLVAAAGSIAGVIDDLKVYKPFVTTY 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1527 457 PANTHER AMINO ACID CARRIER 117 451 - -
Aed3g1527 457 Pfam Transmembrane amino acid transporter protein 115 444 IPR013057 -
Aed3g1527 457 PANTHER OS05G0424000 PROTEIN-RELATED 8 116 - -
Aed3g1527 457 PANTHER OS05G0424000 PROTEIN-RELATED 117 451 - -
Aed3g1527 457 PANTHER AMINO ACID CARRIER 8 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1527 Aed-Chr3 19570973 19578642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1527 19 457 Organic Solute Cotransporters AT1G77380 68.817 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1527 K24917 - gmx:100796082 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1527 3 19570973 19578642 Aed3g1527 3 19570973 19578642 ECH