Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1492 ATGAAAGTGACTTGGAAGAACAACAAGAACAAGAAACGTTGTTTACCCACGTTGTCACACTTCACTGATCTTCCCTTTGAGCACAATCAACAACAACACTCCAACAACGACGCTGAAGATGGCGCGGCGCGTGTTCCCGATCCTGACAAATCCCACGCCACAGAACTGGCCAACGAATTTCAAGCTCAAGGAGACAACCTTGCTGCGGATGGGAAGTACCGGGAAGCACTAGGCAAATGGGAAGCTGCTCTTGCGTTGGCACCTGATGTTCCAGTTGTGCATGAACAAAAGGCCCAAGTTTTACTAGAAATTGGAGATGCTTGGAATGCTTTAAAGGCTGCAACTCGAGCTACTGAATTGGACCCATCATGGGCTGAGGCATGGGTCACACTTGGCAGAGCACAACTAAATTTTGGTGAGCCTGATAATGCTATTGAAAGCTTTGACCGCGCCTTAGCTCTCAAGCCTGATTATGAGGAAGCTCAAGACGATAGGAAAGCTGCATTACGTCTTGTAAAGAAGAGAAAACAGCTTCACTCATCTGGCCTGAGTAACACTCAAAATCGTTATGTGGTCGGTGAAAAGGATGAGAGCTCGTGA 600 0.4733 MKVTWKNNKNKKRCLPTLSHFTDLPFEHNQQQHSNNDAEDGAARVPDPDKSHATELANEFQAQGDNLAADGKYREALGKWEAALALAPDVPVVHEQKAQVLLEIGDAWNALKAATRATELDPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYEEAQDDRKAALRLVKKRKQLHSSGLSNTQNRYVVGEKDESS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1492 199 SMART tpr_5 125 158 IPR019734 GO:0005515
Aed3g1492 199 SMART tpr_5 57 90 IPR019734 GO:0005515
Aed3g1492 199 SMART tpr_5 91 124 IPR019734 GO:0005515
Aed3g1492 199 PANTHER OSMOSIS RESPONSIVE FACTOR 1 197 - -
Aed3g1492 199 SUPERFAMILY TPR-like 55 176 IPR011990 GO:0005515
Aed3g1492 199 MobiDBLite consensus disorder prediction 175 199 - -
Aed3g1492 199 ProSiteProfiles TPR repeat region circular profile. 125 157 - -
Aed3g1492 199 MobiDBLite consensus disorder prediction 178 193 - -
Aed3g1492 199 ProSiteProfiles TPR repeat profile. 125 158 IPR019734 GO:0005515
Aed3g1492 199 Pfam Tetratricopeptide repeat 97 158 - -
Aed3g1492 199 MobiDBLite consensus disorder prediction 23 38 - -
Aed3g1492 199 MobiDBLite consensus disorder prediction 23 50 - -
Aed3g1492 199 Gene3D Tetratricopeptide repeat domain 47 195 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1492 64 169 EF-hand Containing Proteins AT2G32450 31.132 2.00e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1492 - - gmx:100305761 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1492 3 19178218 19183559 Aed3g1492 3 19178218 19183559 ECH