Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1388 ATGCTTTTTGTCAACTTGATCCACAATGAAGGCAAAAGAGGGGGAGGCAAAATCTCTCTAGACTGGGACACCCGTTTGAAAATAGCAATTGGTGTAGCAAGAGGCATTGCACACATCCATGCACAACATGGAGGCAAACTAGTCCATGGAAACATAAAGGCCTCAAACATCTTCCTCAACTCCCGCGGATATGGCTGCCTATCCGATGTCGGCCTAGTGACATTGACGAATCCTACAGCAACTAGGGCAACAGGGTACCGTGCACTGGAAGCAACCGACACACGAAGAGCCACGACGACGCCGGGATCTGACGACGTCTATGGCTTTGGTGTGCTGCTTCTCGAGCTTCTAACCGGGAGGTCTCCCTTGCATGCCAAGGGAGGAGACGAGGTTGTCCACTTGGTTAGGTGGGTGAGCTCTGTGGTGAGAGAGGAGTGGACTGCAGAGGTGTTTGATGTGGAATTACTAAGGTGTCCAAATATTGAAGAGGAGATGGTTGAGATGTTGCAAATTGGAATGGCTTGTGTTGTGAGAGCACAAGATGAGAGGCCGAAAATTGGTGAAGTGGTGAGAATGGTGGAGGAGATAAGGAGAGTGGTGAACACTGAAAATAGATTGTCTACTGAGTCTAGATCAGAAGGTTCGACTACTCCAACCTCTCAGGGAATTGAAACACATTGA 681 0.489 MLFVNLIHNEGKRGGGKISLDWDTRLKIAIGVARGIAHIHAQHGGKLVHGNIKASNIFLNSRGYGCLSDVGLVTLTNPTATRATGYRALEATDTRRATTTPGSDDVYGFGVLLLELLTGRSPLHAKGGDEVVHLVRWVSSVVREEWTAEVFDVELLRCPNIEEEMVEMLQIGMACVVRAQDERPKIGEVVRMVEEIRRVVNTENRLSTESRSEGSTTPTSQGIETH 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1388 226 MobiDBLite consensus disorder prediction 205 226 - -
Aed3g1388 226 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1388 226 Gene3D Transferase(Phosphotransferase) domain 1 5 217 - -
Aed3g1388 226 PANTHER OS05G0588300 PROTEIN 10 218 - -
Aed3g1388 226 Pfam Protein kinase domain 25 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1388 226 PANTHER LRR RECEPTOR-LIKE KINASE 10 218 - -
Aed3g1388 226 MobiDBLite consensus disorder prediction 204 226 - -
Aed3g1388 226 SUPERFAMILY Protein kinase-like (PK-like) 20 194 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1388 Aed-Chr3 17173230 17173910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1388 5 223 Receptor kinase-like Gene Family AT4G23740 57.778 7.69e-85 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed3g1388 Pkinase 2.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1388 - - gmx:100810095 340.887