Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0896 ATGGAAACCGCTGACGTGGTTGAAACGACGACGAATCGTGCCGAATGGGGTTCGGAGAAGAAGAAGAGTTGTTTGAGAACAGAGATTGATACTTCAGCGCCATTTGAATCGGTGAAGGAAGCGGTTACCATGTTCGGAGGTGGTTACTGGAAACCCCTTCACAGTAACAATGCGTGTGTGGCTTCTGATTCTGAGCACCATGTAGAAGAGCTCAGCGCTGAAAAACTGGAGGAGCAGGCTGTGGCATTGGAGAAAGAACTGATCTTGAAAGAAAGGGAAACTCTTGATGTGTTGAAAGAATTGGAAAGTACAAAAAGGCTTGTTGAAAATTTGAAATCAAAGATACACAAGGAAGAGTCTGAAGCGAATTTGAATCTTCAGATGAGCAAATGTGATATAAAATCAGTTGTTGAGGAGAATGAAGAAAAGGAAAACCAAGCGAGTCAATTGAATGTTCTTCAACCTTCAAGGAAAGGTTTTATCCCCTACCCTTCGTCTACTCCGGGCTTAATACTAATGGAATTGAAGCAGGCCAAATTGAATTTAACCAGAACTACTAATAACCTTGCTGATGTCCGAGCTTCGGTTGAATCACTTAATAAGAAGTTAGAGAAGGAAAGAATCTCACTTGAGAAAACACGTGAGAGGTTATCTCAAAATACTTCAAAAATATCTTCGCTTGAGGAAGAGCTAAACCAGACCAGATTAAGGCTGCTGATAGCAAAAGATGCTGAAATTAAAGGTGCTTCAGATGATACTTTGGATATTACAATAGAGCTCCAGCGATTGAGTTCTGAGGCAGAGAATTTCAAAAGAATGGGAGAATCTGCAAAGTCAGAAGTTTTGAGAGCAATGTCTGATATTGAACAGACAAAAACCATGATAAGAACTGCTGAATTCAGATTGGTTGCAGCCAGAAAAATGAAGGAAGCTGCTAGAGCTGCTGAAGCTTTTGCCCTTGCAGAAATTAATGCTTTAGCTAATCATGACAGTTCACCTGGAAATCAGGTTACTCTTTCATTTGAAGAGTATACTGCTCTGACGGGTAAAGCTCAAGATGCAGAGGAACGATCTAAGAAGAGAGTTGCAAGTGCTATGCTTGAAGTAGATGAAGCAAATTTGCCAAACATGGACATTTTGAAAAGGGTAGAAGAAGCTACGGAGGAAGTTAAAACCAGCAAGAAGGCCCTTGAAGAAGCTCTAGAAAGGGTAGCAGCTGCAAATAGAGACAAGGTAGCCGTTGAAGAGGCTTTAAGGAATTGGCAGTCCGAGGGTAAAAAAAGAAGGTCTTCGGTACACAACTCTACCAAGTTCAAAAACGGTTGTTTGTCTAATCAATGTAGAGACTCTCGATTACTTGATGTGAATGGTTTGGATCTGGTAAATGATGATGAAGCTGAGCCAGTTCTAAAGCCAACCCTATCAATAGGACAAATACTTAGCAGGAAGCTGCTTCAACCACAAGAGATTGAAGCCGGAGAAAGAATCTCGGTGAACCCGAATGTGTCATTGGGTCAGATGCTTAGCAAGCAGAACAATAATCCACCAGTTGGTAGACAAGTTGATAAAGAAGCTGGCCATAAGCTGTTTTCTACCAAGAGAAAGAAATTTGGATTTGCACGATTCTCCCATATTTTGTTGAAACAGAAGAAGAAGCCAACCCTGAATTTGAGGTGA 1677 0.412 METADVVETTTNRAEWGSEKKKSCLRTEIDTSAPFESVKEAVTMFGGGYWKPLHSNNACVASDSEHHVEELSAEKLEEQAVALEKELILKERETLDVLKELESTKRLVENLKSKIHKEESEANLNLQMSKCDIKSVVEENEEKENQASQLNVLQPSRKGFIPYPSSTPGLILMELKQAKLNLTRTTNNLADVRASVESLNKKLEKERISLEKTRERLSQNTSKISSLEEELNQTRLRLLIAKDAEIKGASDDTLDITIELQRLSSEAENFKRMGESAKSEVLRAMSDIEQTKTMIRTAEFRLVAARKMKEAARAAEAFALAEINALANHDSSPGNQVTLSFEEYTALTGKAQDAEERSKKRVASAMLEVDEANLPNMDILKRVEEATEEVKTSKKALEEALERVAAANRDKVAVEEALRNWQSEGKKRRSSVHNSTKFKNGCLSNQCRDSRLLDVNGLDLVNDDEAEPVLKPTLSIGQILSRKLLQPQEIEAGERISVNPNVSLGQMLSKQNNNPPVGRQVDKEAGHKLFSTKRKKFGFARFSHILLKQKKKPTLNLR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0896 558 Coils Coil 260 280 - -
Aed3g0896 558 Coils Coil 175 244 - -
Aed3g0896 558 Coils Coil 380 424 - -
Aed3g0896 558 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 15 552 - -
Aed3g0896 558 Coils Coil 66 93 - -
Aed3g0896 558 PANTHER MYOSIN HEAVY CHAIN-LIKE 15 552 - -
Aed3g0896 558 Coils Coil 126 153 - -
Aed3g0896 558 Coils Coil 98 121 - -
Aed3g0896 558 Pfam Weak chloroplast movement under blue light 27 146 IPR008545 -
Aed3g0896 558 Pfam Weak chloroplast movement under blue light 173 428 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0896 Aed-Chr3 6531579 6534741 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0896 - - gmx:100785049 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0896 3 6531579 6534741 Aed3g0896 3 6531579 6534741 ECH
Aed3g0896 3 6531579 6534741 Aed2g0996 2 7865359 7867632 PCT