Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0635 ATGGCGAAGGAAGATGTGTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTCTGTGCGGAAGATATCTGAACTTGTGATTCTCAAACACTATGAGCCGGGAGAGCATGTTGTTCGTGAGGGAGAACGTGGGGACGGTCTTTACTTCATCTGGGAGGGAGAGGCTGAGGTTGTTGGCTCTGTCAGCGCTGATGATGATAATCATCCAGAGTTTCAATTGAAAAGATATGACTATTTTGGTTTTGGTAATAAACTTCATTCTTATCTATCGTGCTTGGTGCTGCCCCATGAACACTCAGAATTGCTGCAGCCGAAGTCTATCTGGAGTGCAGAAAAATCACATGATACATGCTCACTTGTGGAGCATATATTACATTTGGAACCTATAGAGGTAGATATCTTCCGAGGAATCACTCCTCCAAATGCTCCAACATTTGGGAAGGTATTTGGTGGACAATTAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCAAAAAGTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACATACCCATTATATATAAAGCTAAGCGTCTCCGTGATGGGAAGAGTTTTGCTACAAGAAAAGTGGATGCAATTCAAAAGGGAAATGTCATATTCACTTTGCTGGCTTCATTTCATCTTTTATCATTGGAAGAGCTTCGGGAGCAACGTCTTACTGACCCTCGTCTTCCAAGAACTTATCGGAACAAGGTTGCTACAATTGAATTCATTCCCTGGCCCATAGAGATACGGTTCTGTGAACCTAAAACTTCAACAAATCAGACCAAATCTCCTCCTAGTTTGAGATACTGGTTTAAAGCAAGGGGAAAACTTTCAGATGATCAAGCCTTGCATAGGTGTGTGGTAGCATATACTTCAGATCTAATCTTTCTGCAAGTGAGTTTGAACCCCAACCGTCGCAAGGGCATGAAGGCACATGCTGTGAGTCTGGACCACTCCATGTGGTTTCACAGACCTTTACGAGCTGATGACTGGATACTATTTGTGGTGAGTGCCGTAAAGTGTTTCATTATTTTGGGAAAAGTCAAAACAACAAAATACTTGGTAAAAATTATATTTTTCGGAACAATTAAATCACTCAAACAGCTAATAAGACAATAA 1167 0.419 MAKEDVFEFLGNVPLLQRLPGSSVRKISELVILKHYEPGEHVVREGERGDGLYFIWEGEAEVVGSVSADDDNHPEFQLKRYDYFGFGNKLHSYLSCLVLPHEHSELLQPKSIWSAEKSHDTCSLVEHILHLEPIEVDIFRGITPPNAPTFGKVFGGQLVGQALAAASKSVDCQKVVHSLHVYFLLVGDFNIPIIYKAKRLRDGKSFATRKVDAIQKGNVIFTLLASFHLLSLEELREQRLTDPRLPRTYRNKVATIEFIPWPIEIRFCEPKTSTNQTKSPPSLRYWFKARGKLSDDQALHRCVVAYTSDLIFLQVSLNPNRRKGMKAHAVSLDHSMWFHRPLRADDWILFVVSAVKCFIILGKVKTTKYLVKIIFFGTIKSLKQLIRQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0635 388 Gene3D Hotdog Thioesterase 116 230 - -
Aed3g0635 388 CDD CAP_ED 15 103 IPR000595 -
Aed3g0635 388 SMART cnmp_10 15 123 IPR000595 -
Aed3g0635 388 Gene3D Jelly Rolls 2 103 IPR014710 -
Aed3g0635 388 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Aed3g0635 388 CDD Thioesterase_II_repeat2 137 228 - -
Aed3g0635 388 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Aed3g0635 388 SUPERFAMILY cAMP-binding domain-like 6 90 IPR018490 -
Aed3g0635 388 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 353 IPR029069 -
Aed3g0635 388 Pfam Thioesterase-like superfamily 149 355 - -
Aed3g0635 388 PANTHER ACYL-COA THIOESTERASE 52 357 - -
Aed3g0635 388 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 124 229 IPR029069 -
Aed3g0635 388 PANTHER ACYL-COA THIOESTERASE 52 357 IPR003703 GO:0006637|GO:0047617
Aed3g0635 388 Pfam Cyclic nucleotide-binding domain 34 85 IPR000595 -
Aed3g0635 388 CDD Thioesterase_II_repeat1 283 353 - -
Aed3g0635 388 Gene3D Hotdog Thioesterase 239 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0635 Aed-Chr3 4510310 4517022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0635 1 352 Acyl Lipid Metabolism Gene Families AT1G01710 62.827 1.55e-173 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0635 K01068 - gmx:100813197 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0635 3 4510310 4517022 Aed3g0635 3 4510310 4517022 ECH
Aed3g0635 3 4510310 4517022 Aed2g0685 2 4989744 4995156 PCT