Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0621 ATGGTTTCACTTGGAGCTGCTGCCTCTGCTGCTGTGTGGTGTTGCTGTTCTGTGTTCATGATGCTTCTCACTTTGAGTTTTGCTGGGGATATAGTGCACCCTGATAGTATTGCTCCCAGAAGGCCTGGCTGTGACAACAACTTTGTCCTGGTTAAAGTCCCTACTTGGATTGATGGTGTGGAAAACTTTGAGTATGTTGGCGTTGGTGCAAGATTTGGCCCTACATTAGAATCAAAAGAAAAACATGCTATCCATACTAGAGTTGCGATTGCGGACCCTCCTGATTGTTGTAGCAAGCCTAAGAATATGCTCACTGGCGAGATCATTTTGGTGCAACGAGGACAATGTAGTTTCACAATCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCCATCCTCATTATAAATTATCGTACAGAACTTTTCAAGATGGTTTGTGAAGCGAATGAAACTGATGTTGATATTGGAATACCTACTGTCATGCTTCCACAAGATGCTGGTGAAAACTTGAAAAGTCACATACTAAACAAATCAGTAGTGTCGGTACAGTTGTATTCTCCACTGCGTCCATTGGTTGACGTTGCAGAAGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTCTCTGTGCTTCTTACTGGTCTGCCTGGACTGCAAGAGAGTCTGCCATTGAGCAGGAGAAGCTATTAAAGGATGCTTCAGATGAATATGTAAATGCAGAGAATGTTGGTTCTAGTGCATATGTGGAAATTAGTACTACAGCAGCAATATCATTTGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTTTACAAATTAATGGCATCATGGTTTGTTGAAGTTCTGGTAGTTCTATTTTGCATTGGTGGGGTTGAGGGACTACAAACTTGCTTGGTGGCTCTATTCCCATGTCATGTTATGGAATTGACACCAATTCACCAAAATATGTACAGTTTCAGATGGTTCCAGCATGCTGCAGAAACATTTGTGAAAGTACCCTTCTTTGGTGCTGTATCATATCTGACGGTTGCTGTTACTCCCTTCTGTATTGTGTTTGCTGTGCTTTGGGGAGTTTATCGCCATGTATCATTTGCTTGGATTGGTCAAGATATTCTTGGCATCACATTGATAATTACAGTTCTTCAGATTGTGCGGATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCCTTCCTATACGACATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAGGAGTGGAGAAGATGGTATCCCTATGCTACTCAAGATACCACGTATGTTTGATCCTTGGGGTGGTTACAGCATCATCGGTTTTGGGGACATAATCTTACCTGGTCTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAAAACCTTCGAGATGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTTATCACATACGTGGCTTTGAACTTAATGGATGGACATGGTCAACCAGCTTTGCTTTATATTGTCCCATTTACACTTGGAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGACAAGAGGGGAACCAAAAATACCTTGCCCTCATCACATCCAAGAGGATCAATCAACAAACCAGTGA 1677 0.4204 MVSLGAAASAAVWCCCSVFMMLLTLSFAGDIVHPDSIAPRRPGCDNNFVLVKVPTWIDGVENFEYVGVGARFGPTLESKEKHAIHTRVAIADPPDCCSKPKNMLTGEIILVQRGQCSFTIKANIAEEAGASAILIINYRTELFKMVCEANETDVDIGIPTVMLPQDAGENLKSHILNKSVVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTARESAIEQEKLLKDASDEYVNAENVGSSAYVEISTTAAISFVVIASCFLVMLYKLMASWFVEVLVVLFCIGGVEGLQTCLVALFPCHVMELTPIHQNMYSFRWFQHAAETFVKVPFFGAVSYLTVAVTPFCIVFAVLWGVYRHVSFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRDGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKVLWTRGEPKIPCPHHIQEDQSTNQ 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0621 558 PANTHER SIGNAL PEPTIDE PEPTIDASE 13 556 IPR007369 GO:0004190|GO:0016021
Aed3g0621 558 Pfam Signal peptide peptidase 248 541 IPR007369 GO:0004190|GO:0016021
Aed3g0621 558 Gene3D - 46 188 - -
Aed3g0621 558 Pfam PA domain 94 171 IPR003137 -
Aed3g0621 558 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 13 556 - -
Aed3g0621 558 SUPERFAMILY PA domain 104 143 IPR046450 -
Aed3g0621 558 Coils Coil 223 243 - -
Aed3g0621 558 SMART psh_8 247 530 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0621 Aed-Chr3 4409870 4416219 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0621 K09597 - gmx:100808921 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0621 3 4409870 4416219 Aed3g0621 3 4409870 4416219 ECH
Aed3g0621 3 4409870 4416219 Aed2g0672 2 4860567 4866201 PCT