Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0598 ATGGATGTAGAAGTGATGAAAAAGTCACCTTCTCAAGAAAAATATGGCAGGGTTCAATCTGCAATAAGGTTGTTAGTGTTGGTTGTGTTTCTTTGTTGGATTTTCGTATGGATAGTGACTCCCACAAACACTTACAAACAAAATTGGAAGCCTTGGCTTCAAGCAAATACTAACTCTATTTTTGGTACACAAGGTTCAATGCTTCTGGTTTACACTTTTCCAATCTTGTTCATAGCTGTTTTGGGATGTGTCCACATCCACATATCCAAAAAATTAGGAAACGGTTTCAGCATGGAAAGCTGCAGCAGTTATGGCCAGAAACGTGAGGTATCTATATGGAAGCGTTTGGTGCTTGTGAGAGGCCCTCTTGGCATAGTTTCTGGAACAGAAATGGTGTTCTTGTTAATGTTCATCGTTCTCCTAGTTTGGTCCTTTTTAATTTATCTACAAAACGGCTTTGCCAAAATCACCCCAAAATCAGCAGCAGAACACGGTCTTAAAGTGTGGGAGAAGAAACTAAGTAATGCATCAGTGAGGTTGGGCACAGTTGGGAACATATGCTTGGCATTCCTGTTTTTCCCGGTTGCTCGTGGTTCCTCAGTGCTACCACTTCTTGGACTCACATCAGAGAGTTGCATCAAATACCATATTTGGCTAGGACACGTGGCCATGACCCTCTTCACTGCTCATGGTGTTGGTTTCATCATCTTTTGGACAGTTACTAATAGACTTTCAAAGATGCTGGAATGGAAAAAAAATGGGATATCAAATGTAGCTGGAGAAGTTGCTTTGCTTTCTGGTTTGTTGATGTGGATTGGAACCATCCCTCGTATAAGGAGAAAAGTTTTTGAGCTCTTCTTCTACACTCACCACCTCTACATCCTCTTCATTGTCTTCTTCATCTTTCACGTTGGCATTTTCTATGCATGCACTATGCTCCCTGCTTTCTACCTCTTCTTACTTGATCGTTACCTAAGGTTTTTGCAATCAAGACGCAGTGTTCGTTTGGTCTCAGCTCATTTGACTTATAATCCCACAAGTATTATGTTCATAAATGTACCAAGTATATCCAAGCTACAGTGGCATCCATTTACCATTACTTCCAATAGTAATTTGGAGTCCAAAATGCTGAGTGTTGTCATTAAAGGTGAAGGAACTTGGTCCCAGAAGCTCTACCAGATGCTTTCAACCCCTTCTGCAATAGATCATCATCTCAATGTCTCTGTTGAAGGTCCCTATGGACCAGCATCAACCAATTATCTAAGGAACTCTTCCTATCTCTCAATGCTAAACCTGATCCTTCCAAATTCTGGCACCCCATATGATATTTCCAACATGCAACTACAAATTAAGGCCTACATCACAAGAAATGAGATTGAGGAGCATAAATTGGAAAACCAAAATCACCTTCAACAAATATGGTTCAAGCCCAAGGCAACAGATGCACCCATATCAGCTATTTTAGGTCCAAACAATTGGCTTTGGCTTTGTGCCATAATCTCGTCCTCGTTCATAATTTTCCTTATCATAATTGGGATCATTACCAGATACATCATTTTCCCTATAGACCATAATTCTAATAAAATATTTTCACATACTTTGAGGTCATTCCTCAACATGTTTGCAATATGTGTGTCCATAGTAATGGCAGCTAGTGCAGCTGTTCTATGGAACAAGAAATACAATGACAAAGAAGCAAAGAAGATTCAGAACTTAGAAGGGTCATCAGCAGCAGAATCCACTGATGAAGCAGATAAAGAACTGGAAAGCCTCCCACAACAATCCCTTGTTCAAGCCACAAAGGTGCATTATGGTGTAAGACCTGATCTAAGAAGACTGTTATTGGAACTTAGAGGGTCAAGAGTGGGAGTTTTTGTTTCTGGACCCAAGAAAATGAGGGAAGAGGTTGCAGCCATTTGCTCATCTGATTTAGCAGAAAATCTGCATTTTGAGTCCTATAGCTTTAACTGGTAG 1974 0.4027 MDVEVMKKSPSQEKYGRVQSAIRLLVLVVFLCWIFVWIVTPTNTYKQNWKPWLQANTNSIFGTQGSMLLVYTFPILFIAVLGCVHIHISKKLGNGFSMESCSSYGQKREVSIWKRLVLVRGPLGIVSGTEMVFLLMFIVLLVWSFLIYLQNGFAKITPKSAAEHGLKVWEKKLSNASVRLGTVGNICLAFLFFPVARGSSVLPLLGLTSESCIKYHIWLGHVAMTLFTAHGVGFIIFWTVTNRLSKMLEWKKNGISNVAGEVALLSGLLMWIGTIPRIRRKVFELFFYTHHLYILFIVFFIFHVGIFYACTMLPAFYLFLLDRYLRFLQSRRSVRLVSAHLTYNPTSIMFINVPSISKLQWHPFTITSNSNLESKMLSVVIKGEGTWSQKLYQMLSTPSAIDHHLNVSVEGPYGPASTNYLRNSSYLSMLNLILPNSGTPYDISNMQLQIKAYITRNEIEEHKLENQNHLQQIWFKPKATDAPISAILGPNNWLWLCAIISSSFIIFLIIIGIITRYIIFPIDHNSNKIFSHTLRSFLNMFAICVSIVMAASAAVLWNKKYNDKEAKKIQNLEGSSAAESTDEADKELESLPQQSLVQATKVHYGVRPDLRRLLLELRGSRVGVFVSGPKKMREEVAAICSSDLAENLHFESYSFNW 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0598 657 PRINTS Cytochrome B-245 heavy chain signature 618 636 IPR000778 GO:0016020|GO:0016491
Aed3g0598 657 PRINTS Cytochrome B-245 heavy chain signature 283 303 IPR000778 GO:0016020|GO:0016491
Aed3g0598 657 PRINTS Cytochrome B-245 heavy chain signature 258 281 IPR000778 GO:0016020|GO:0016491
Aed3g0598 657 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 314 419 IPR017927 GO:0016491
Aed3g0598 657 Pfam Ferric reductase NAD binding domain 421 641 IPR013121 GO:0016491
Aed3g0598 657 Pfam FAD-binding domain 340 417 IPR013112 GO:0016491
Aed3g0598 657 PANTHER FERRIC REDUCTION OXIDASE 2 18 420 - -
Aed3g0598 657 SFLD Ferric reductase subgroup (FRE) 19 426 - -
Aed3g0598 657 PANTHER FERRIC REDUCTION OXIDASE 2 422 656 - -
Aed3g0598 657 SFLD Ferric Reductase Domain 41 426 - -
Aed3g0598 657 PANTHER NADPH OXIDASE 18 420 - -
Aed3g0598 657 Pfam Ferric reductase like transmembrane component 180 300 IPR013130 -
Aed3g0598 657 PANTHER NADPH OXIDASE 422 656 - -
Aed3g0598 657 CDD NOX_Duox_like_FAD_NADP 338 422 - -
Aed3g0598 657 Gene3D - 524 657 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0598 Aed-Chr3 4245143 4250112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0598 9 657 Miscellaneous Gene Families AT1G01580 48.960 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0598 K00521 - gmx:100814642 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0598 3 4245143 4250112 Aed2g0650 2 4694009 4697388 PCT