Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0597 ATGAAGCCATTCATGTCCACCACCATGAAGAACAACAACAACCTCAAAGATTCAGAACACTTCCACTCACCATGGACCATAGCAAAACTAATGACATCCTTCTTCCTCTTAATCTCCATTTCCTACCTCTTCTACTCCCTCGGATTCATCACACATTCATATGATTGCCCTCAAAAAAAGCCTCACCCTCTTCCCACCACAACTCACTTTTCCAACAACAACAACACTGCTCCTCCCCCATCTCAACACATTGAGAAGAAAACCAACATTTCCCACATAATGTTTGGCATAGCAGCCTCGTCCAACCTATGGAGCCACAGAAAAGAGTACATCAAACTATGGTGGAGGCCAAATGAAACAAGGGGCAACGTGTGGCTAGACCAACACGTCAAAACCGAACCAAGTGAAGTGCACCTTCTACCAACGTTGAGAGTATCAAGTGATGTCTCGAAGTTCAAGGTCAAGAATCCACTGGGCGATAGGTTGGGAGTTCGAATCTCTCGGATAGTGTCAGAGACAGTGAGGCTAACTGGGAAGGAGAACAAGGACAATGTGAGGTGGTTTGTGATGGGGGATGATGACACTTTCTTTGTGACTGAGAATTTGGTGAAGGTGCTTCAGAAATATGATCACAATCAGTTCTATTACATTGGGACAAATTCAGAGAGCCACTTGCAGAACATTCACATATCTTATAATATGGCTTATGGGGGTGGAGGGTTTGCAATTAGTTACCCTTTGGCAGTGGCATTGGAGAGAATGCAGGATAAGTGCCTTCAGAGGTACCCTGCATTGTTTGGCTCTGATGATAGGATCCAGGCTTGTATGGCAGAGCTTGGTGTCCCTCTCACCAAGGAAATTGGCTTTCACCAGTTTGATATATACGGCAACGTGTTTGGGCTCCTAGCAGCACATCCCATCACACCGCTAGTCTCAATGCATCACCTGGACGTGGTTGAGCCCATATTTCCAAACGTGAACCGTGTTGAGGCCCTGCAGCGGCTCACTGGGCCCATGAAAGTGGACTCGTATGGGCTTATGCAACAGTCCATTTGCTACGACAAAGCCCGGCATTGGACCATATCCGTGTCTTGGGGCTATACGGTTCAAATATTCCGAGGCATTTTCTTGGCCCGGGACATGGAGATGCCGGCGAGGACTTTCTTGAATTGGTACCGGCGGGCGGATTATACGAGTTTTCCGTTCAACACGCGCCCTTTCAGCCGGAATTCTTGCCAGAAACCTTTTGTTTTTTACTTGTCTAATGCAACCCTTAATGGAGTTGGCGATGAAAATGTGAGTGAGTATATTCGGGTCCAGCCCAACCCGGGGTGCAAGTGGAAAATGCCGGATCCAACCCAAATCCAAGTAATAAAGGTTCATAAGAAACCCGACCCGCATTTGTGGGACAAGTCTCCAAGAAGAAATTGTTGCAGGCTTCAACCGACAAAGGAAAAAGGAACTCTGGTGATTGATGTCGGAGAATGCAGAAAAGATGAATTTGCTCAAACATAG 1515 0.4673 MKPFMSTTMKNNNNLKDSEHFHSPWTIAKLMTSFFLLISISYLFYSLGFITHSYDCPQKKPHPLPTTTHFSNNNNTAPPPSQHIEKKTNISHIMFGIAASSNLWSHRKEYIKLWWRPNETRGNVWLDQHVKTEPSEVHLLPTLRVSSDVSKFKVKNPLGDRLGVRISRIVSETVRLTGKENKDNVRWFVMGDDDTFFVTENLVKVLQKYDHNQFYYIGTNSESHLQNIHISYNMAYGGGGFAISYPLAVALERMQDKCLQRYPALFGSDDRIQACMAELGVPLTKEIGFHQFDIYGNVFGLLAAHPITPLVSMHHLDVVEPIFPNVNRVEALQRLTGPMKVDSYGLMQQSICYDKARHWTISVSWGYTVQIFRGIFLARDMEMPARTFLNWYRRADYTSFPFNTRPFSRNSCQKPFVFYLSNATLNGVGDENVSEYIRVQPNPGCKWKMPDPTQIQVIKVHKKPDPHLWDKSPRRNCCRLQPTKEKGTLVIDVGECRKDEFAQT 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0597 504 Gene3D - 80 341 - -
Aed3g0597 504 Pfam Protein of unknown function, DUF604 226 478 IPR006740 -
Aed3g0597 504 PANTHER FRINGE-RELATED 10 503 - -
Aed3g0597 504 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 10 503 - -
Aed3g0597 504 MobiDBLite consensus disorder prediction 64 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0597 Aed-Chr3 4235258 4241739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0597 27 498 Glycosyltransferase AT5G41460 57.143 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0597 - - gmx:100777888 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0597 3 4235258 4241739 Aed2g0647 2 4681014 4686932 PCT