Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0576 ATGGCGGGGTTGTTGGACAAAGCGAAAACCTATGTTTCGGAAAAAGTAGCGAACATGCCGATGCCGGAGGCGAGTGTAACCGACGTGGACTTCAAGCGCGTGAGCCGCGACAGCGTGGAGTACTTGGCCAAAGTCTCTGTTTCGAACCCTTATTCCACTCCCATTCCCATTTGTGAGATCAAGTACTCCCTCAAAAGTGCTGGCAGGGAGATAGCATCAGGGACAATACCTGACCCAGGATCGTTGAAGGCAAGCGACACAACAATGTTGGAAGTGCCAGTGAAGGTGCCTCATAGTGTATTACTGAGTTTGGCAAAGGACATTGGTGCAGATTGGGACATTGATTACCAATTAGATCTTGGTCTAGTTATTGATCTTCCTGTCATTGGCAGCTTCACCATTCCTCTTTCTCAGAAGGGAGAGATCAAGCTCCCTACCCTCACTGACATGTTTGCCTAA 459 0.488 MAGLLDKAKTYVSEKVANMPMPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEIKYSLKSAGREIASGTIPDPGSLKASDTTMLEVPVKVPHSVLLSLAKDIGADWDIDYQLDLGLVIDLPVIGSFTIPLSQKGEIKLPTLTDMFA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0576 152 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Aed3g0576 152 PANTHER - 1 152 IPR045043 -
Aed3g0576 152 SMART why 24 141 IPR013990 GO:0009269
Aed3g0576 152 Gene3D - 17 151 - -
Aed3g0576 152 PANTHER DESICCATION PROTECTANT PROTEIN LEA14 1 152 - -
Aed3g0576 152 SUPERFAMILY LEA14-like 3 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0576 Aed-Chr3 4084128 4086000 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0576 - - gmx:547837 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0576 3 4084128 4086000 Aed3g0576 3 4084128 4086000 ECH
Aed3g0576 3 4084128 4086000 Aed2g0615 2 4432053 4432914 PCT