Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0460 ATGGCATCCATGAACCCTTTTGATTTGTTGGGCGACGACGCTGAGGACCCTTCTCAGCTCATCGCATCCGAACAACTCAAGGCGGCTGCTGCTGCAGCCGCGGCTCCCAAGAAGGCGCCGGCTCAGCAGAACAAGCCGGCTCAGCTCCCTTCCAAGCCGCCTCCTCCGGCTCAGGCTGTGAGGGATGCCAGAAGTGAGCCGTTTCGTGGAGGCCGTGGAGGTGGTGGACGTGGTCGCGGGTTTAGTCGTGACTCTTCCAATCAAGAGAACTCATTCCCTACCACTGGAGCTCCTTATAATCAGGGTTCTTTTGAAGGAGATGCTGGGAAGTCTTCTGAAAGACGTGGTTATGGTGGACCACGAGTTCCTTACCGTGGTGGTGCTCGTCGTGGAGGTTTCAGCAATGGTGAAACTGGTGAAGGTGAAGAAGGACGACCTCGAAGAGAATTTGATCGTCGCAGTGGGACTGGACGAGGAAATGATTTCAAACGTGAAGGCTCTGGACGTGGTAACTGGGGAACACAAACTGATGATATTGCTCAGGCAACTGACGAGGTTGCGAATGAAACTGAAAAGAATTTGGCTGATGAGAAGCCTGCAGTTGAAGAAGATGTAGCTGATGGAAACAAGGACACTCCTACTAATGAGACTGAAGAAAAAGAGCCCGAAGATAAGGAGATGACTCTGGAGGAATATGAGAAAGTGTTGGAAGAGAGAAGAAAGGCCTTCCAAGCTCTCAAGACTGAAGGGAGAAAGGTGGACACTAAAGAGTTTGAAACCATGCAGCCCTTATCAAGCAAGAAAGACAATCATGACATATTCATTAAACTGGGTTCTGATAAAGATAAGCGAAAAGAGGCCTTTGAGAAGGAAGAAAAATCCAAAAAGTCTGTGAGCATCACCGAGTTTCTGAAGCCTACTGAGGGGGAAGCATACTATAACCCAGGACGTGGCAGGGGCCGTGGCCGTGGTTCACGAGGTGGTTTCCGTGGAGGTCCCACCAACAATGCACCGGCTCCATCCATTGAAGATCCTGGGCATTTCCCAACCTTGGGTGCCAAGTGA 1065 0.5089 MASMNPFDLLGDDAEDPSQLIASEQLKAAAAAAAAPKKAPAQQNKPAQLPSKPPPPAQAVRDARSEPFRGGRGGGGRGRGFSRDSSNQENSFPTTGAPYNQGSFEGDAGKSSERRGYGGPRVPYRGGARRGGFSNGETGEGEEGRPRREFDRRSGTGRGNDFKREGSGRGNWGTQTDDIAQATDEVANETEKNLADEKPAVEEDVADGNKDTPTNETEEKEPEDKEMTLEEYEKVLEERRKAFQALKTEGRKVDTKEFETMQPLSSKKDNHDIFIKLGSDKDKRKEAFEKEEKSKKSVSITEFLKPTEGEAYYNPGRGRGRGRGSRGGFRGGPTNNAPAPSIEDPGHFPTLGAK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0460 354 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 354 IPR039764 GO:0003723
Aed3g0460 354 MobiDBLite consensus disorder prediction 169 188 - -
Aed3g0460 354 Pfam Hyaluronan / mRNA binding family 146 253 IPR006861 -
Aed3g0460 354 MobiDBLite consensus disorder prediction 280 354 - -
Aed3g0460 354 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 354 - -
Aed3g0460 354 MobiDBLite consensus disorder prediction 280 299 - -
Aed3g0460 354 SMART HABP4_PAI_RBP1_2 146 254 IPR006861 -
Aed3g0460 354 MobiDBLite consensus disorder prediction 1 228 - -
Aed3g0460 354 Gene3D - 144 257 - -
Aed3g0460 354 MobiDBLite consensus disorder prediction 189 228 - -
Aed3g0460 354 MobiDBLite consensus disorder prediction 140 165 - -
Aed3g0460 354 MobiDBLite consensus disorder prediction 81 107 - -
Aed3g0460 354 Coils Coil 229 249 - -
Aed3g0460 354 Pfam Stm1 1 74 IPR019084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0460 Aed-Chr3 3277216 3281435 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0460 K13199 - gmx:100814825 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0460 3 3277216 3281435 Aed3g0460 3 3277216 3281435 ECH
Aed2g1756 2 22264250 22268161 Aed3g0460 3 3277216 3281435 PCT