Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0454 ATGGGTTGCGCGGCGTCGAAGCTGGAAAACGAGGACACTGTGCGGCGGTGCAAGGAGCGCCGTCGCCTCATGAAGGAGGCCGTGTACGCCCGTCACCACCTGGCCGCGGCCCACTCCGACTACTGCCGGTCCCTCCGCCTTACCGGCTCCGCCCTCTCCACCTTCGCCGCCGGTGAACCCCTCTCCGTCTCCGACCACACCCCCGCCGTGTTCCTCAACAACTCCCAACAACCACAACCCCCACCTCCTCAACACCACCAACACCACCCTCCTCCTTCTCCGTCTCTATCTCCTCCGCCGCATCCGAAACTCGCCCCCATCCAGCCCCGGCGCCGCAAACCCCCGGCGCTGCCGAAGCTGCCGCACATCCTCTCCGACTCAAGCCCCTCCTCCACCCCGAGAAGCCACGTGTCGAATTTCGCCTCGAACTTCTTCCCCACCGCACAGTCCACCTACTCCTCCACCCCTTCCCAAACCTCCTCCGTTTGGAACTGGGAAAATTTCTACCCTCCTCCTCCCCCTCCCGCCTCCGATTACTTCCCCGAACAACAACAACAACAACAAAAACTCTCACACTCACAGTCTCAAACACCTTCTCATTACTCTCACAAAACACAAACACAAACACCTTCTCATTACTCTCACAAGTCACAAACACCTTCTCATTACTTTCACAAGACACAGCACCACGGCACCAATCCCCACGACTCCGACTCCGAGAGATCTGAATACGATTACTTCGACGGGAAGCTCGAAACTGATAAAACCGATTCTCACTCTCATCTCTCTAACCATCATCTTCCCGAGGAGTACACCGAGACTGAGAGAGAAGAGGTTCAGTGTAGCGAGTGGGGGGATCATTACAGCACCACGAGTTCCTCTGATGATGGTGTCGAGGGGGATGTGGAGTCGCGCTCCGAGATCGGAACCCGCTCCAATTTCGGATCCTCGGTGCGGGCCGAGTCGGTGGTTGGTGGCGGAATGAAGGGGTTCGACGCGGCGTCGTCGGTGGCGGAGATGAAGATGGTGGTGAGGCACAGGGACTTGAAGGAGATCGTGGAGGCTATTAAGGAGAATTTTGATAACGCGGCTTCTGCTGGGGATCAGGTTTCTGATATGCTCGAGATCAGTAAGGCGCAGCTTGATCGAAGCTTCAAGCAATTGAGAAAGACGGTGTATCACTCGAGTAGCATACTGAGCAACTTGAGCTCGAGTTGGACCTCGAAACCGCCGCTGGCGGTTAAGTACCGGCTCGACACCGGTTCACTGGAGGAACCGGGCAGTCACAAGAGTCTTTGCAGCACTTTGGAACGCCTTTTGGCTTGGGAGAAGAAGCTCTACGAGGAGGTTAAGGCTAGAGAAGGTGTGAAGATTGAACATGAAAAGAAACTGTCAGCGCTGCAGTCTCAGGAATACAAAGGAGACGATGAAGCTAAGATATTCAAAACCAAGACTTCCATAAATAGGCTGCAGTCACTAATAATTGTTACATCTCAGGCCGTGTCTACCACCTCTACTGCCATTATTGGCCTTAGGGACTCTGATCTTGTCCCTCAGCTTGTTGATCTCATTCATGGATTCAAGTACATGTGGAGATCAATGCACCGCTACCATGAAATTCAAAGCAACATAGTGCAGCAAGTCCGCGGCCTTGTGAACAGATCATCAAGAGGTGACTCCACTTCTGAACTGCACAGGCAGGCAACCCGGGACCTTGAATCGGCCGTGTCAGCTTGGCACTCCAGTTTTTGTCGCCTTATCAAATTTCAACGTGAATTCATCCTGTCCTTGCATGGCTGGTTCAAACTCAGCCTTCTTCCAGTTCATAATGATAACATCAACAACAGCAGGGAAACCTCTGATACATACCACTTTTTTGATGAATGGAAACTCGCACTTGACCGTGTCCCGGACACGGTTGCATCTGAAGCCATCAAGAGCTTTATCAATGTTGTCCATGTGATATCTTCCAAGCAAGTGGAAGAGCTGAAGATAAAAAAACGAACCGAGACAACATCCAAGGAACTCGAGAAAAAGGCTTCCTCTCTGAGAAACCTAGAGAGGAAGTTCTACAGCTCATATTCTATGGTAGGCATTAGCCTTCCTGATACTGCACCTGACAATGGACAAGTTTTGGATGCACGTGACCCTCTTGCTGAGAAAAAACTGGAACTGGCAACATGCCAAATGCGCGTCGAAGATGAAATGCTGAGGCATTCAAAAGCTGTGGAGGTAACAAGAGCCATGACCCTCAACAATTTGCAAACAGGATTGCCTGGAGTGTTTCAGGCACTGACCAGTTTCTCTTCCTTGTTCACTGAGGCTCTTGAATCAGTGTGTACTCGTTCATATGCCATCAAGTAG 2364 0.5199 MGCAASKLENEDTVRRCKERRRLMKEAVYARHHLAAAHSDYCRSLRLTGSALSTFAAGEPLSVSDHTPAVFLNNSQQPQPPPPQHHQHHPPPSPSLSPPPHPKLAPIQPRRRKPPALPKLPHILSDSSPSSTPRSHVSNFASNFFPTAQSTYSSTPSQTSSVWNWENFYPPPPPPASDYFPEQQQQQQKLSHSQSQTPSHYSHKTQTQTPSHYSHKSQTPSHYFHKTQHHGTNPHDSDSERSEYDYFDGKLETDKTDSHSHLSNHHLPEEYTETEREEVQCSEWGDHYSTTSSSDDGVEGDVESRSEIGTRSNFGSSVRAESVVGGGMKGFDAASSVAEMKMVVRHRDLKEIVEAIKENFDNAASAGDQVSDMLEISKAQLDRSFKQLRKTVYHSSSILSNLSSSWTSKPPLAVKYRLDTGSLEEPGSHKSLCSTLERLLAWEKKLYEEVKAREGVKIEHEKKLSALQSQEYKGDDEAKIFKTKTSINRLQSLIIVTSQAVSTTSTAIIGLRDSDLVPQLVDLIHGFKYMWRSMHRYHEIQSNIVQQVRGLVNRSSRGDSTSELHRQATRDLESAVSAWHSSFCRLIKFQREFILSLHGWFKLSLLPVHNDNINNSRETSDTYHFFDEWKLALDRVPDTVASEAIKSFINVVHVISSKQVEELKIKKRTETTSKELEKKASSLRNLERKFYSSYSMVGISLPDTAPDNGQVLDARDPLAEKKLELATCQMRVEDEMLRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALESVCTRSYAIK 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0454 787 Pfam Protein of unknown function (DUF632) 349 653 IPR006867 -
Aed3g0454 787 MobiDBLite consensus disorder prediction 75 114 - -
Aed3g0454 787 MobiDBLite consensus disorder prediction 150 166 - -
Aed3g0454 787 MobiDBLite consensus disorder prediction 229 283 - -
Aed3g0454 787 MobiDBLite consensus disorder prediction 180 227 - -
Aed3g0454 787 MobiDBLite consensus disorder prediction 150 319 - -
Aed3g0454 787 PANTHER UNCHARACTERIZED 1 787 - -
Aed3g0454 787 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Aed3g0454 787 PANTHER BZIP DOMAIN CLASS TRANSCRIPTION FACTOR (DUF630 AND DUF632)-RELATED 1 787 - -
Aed3g0454 787 MobiDBLite consensus disorder prediction 71 136 - -
Aed3g0454 787 Coils Coil 666 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0454 Aed-Chr3 3212735 3218930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0454 1 89 Acyl Lipid Metabolism Gene Families AT2G27090 33.000 1.39e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0454 - - gmx:100815888 1251.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0454 3 3212735 3218930 Aed3g0454 3 3212735 3218930 ECH
Aed2g1763 2 22336709 22341892 Aed3g0454 3 3212735 3218930 PCT