Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0162 ATGGCCACCACCACGCTTTATTCAACGCATTGTCGTTCACTCGTTACTTCCTCCTCCTCCTCCTCATCGGCGTCGTCGTTGCAACCGTGTCCTCTGTCGTCTAACCTTCAACGCGTCACCTTCTCACAGCGCTTTCTCGCCTCCAAGGTTTCTCTCAAGTCTCAACCCCAACCGTATCAGATTCCCGTCCACACCCAGCAACATGAAGGGCGTGTGAATGTAGGTACAGTAGCAGCTGCTGTTGAAAATGGCACTTCTCACCAGCAATTGAAGGCTGACTTATTGTCTGTTAAGTCCCCGGAGAAGTCTCGAGCTGAAGACGGTTTTGATAAGGATGAAAACAAGTCCACTGTTAGTATTACTATTGTTGGAGCCTCTGGAGACCTTGCTAAGAAGAAGATATTTCCGGCTCTCTTTGCACTTTACTACGAGGATTGTCTCCCTAAGCACTTCACCATATATGGTTATGCACGAAGTAAGATGACTGATGCAGAACTGAGAAATATGGTTAGCAAGACCCTCACTTGTAGAATTGATAAGAGAGAGAACTGCAATGAGAAGATGGACCAATTTCTAAAGAGATGTTTCTACCATTCTGGTCAATATGATTCTCAGGACAACTTTGCAGCGCTAGACAAGAAGCTGAAGGAACATGAGGGTGGGAGAACTTCTAATCGCCTGTTTTATCTCTCAATTCCTCCTAATATATTCATAGATGCTGTTAAATGTGCAAGCTTGTCAGCTTCTGCTGGTAATGGTTGGACCAGGGTCATTGTTGAAAAGCCTTTTGGTCGTGATTCAGAATCTTCAGCTGCATTAACAAAATCACTCAAGCAGTATCTGACAGAGGATCAAATTTTCAGGATTGACCACTATCTTGGGAAAGAGCTTGTGGAAAATCTTTCTGTTCTCCGATTCTCAAATCTCATCTTTGAACCATTATGGTCAAGGCAGTATATTAGAAATGTACAGTTGATATTCTCAGAAGATTTTGGCACTGAAGGACGTGGCGGGTACTTTGACCATTATGGTATCATAAGAGACATTATGCAGAACCATTTACTTCAAATACTAGCACTCTTTGCGATGGAAACCCCTGTTAGTTTGGATGCGGAGGATATTAGAAATGAAAAGGTCAAGGTTCTTCGCTCAATGAGACCCCTGCGACTTGAGGATGTGATTATAGGTCAGTATAAGAGCCACACAAGAGGAGGCGTTACATATCCCGCATATGTTGATGACAAAACTGTTCCAAGCGGCAGCTTAACTCCAACATTTGCTGCAGCTTCCCTCTTCATAAATAATGCAAGATGGGATGGGGTACCATTTCTGATGAAGGCTGGGAAAGCATTACACAACAAAAGAGCTGAGATACGGGTACAGTTCAGGCACGTGCCAGGTAATCTGTACAATCGAAATTTCGGTGCTGATCTTGATCGGGCTACAAATGAGCTTGTTATAAGAGTTCAGCCTGACGAGGCTATTTATTTGAAGATAAACAACAAAGTTCCAGGTCTGGGAATGAAGTTGGACCGCAGTAATCTGAATCTTCACTATGCAGCAAGATATTCAAATGAGATTCCAGATGCTTATGAAAGGCTACTTCTGGATGCCATTGAAGGAGAAAGAAGACTCTTTATTCGTAGTGATGAACTGGATGCTGCTTGGTCACTCTTTACACCTGTACTGAAGGAGCTAGAAGAGAAGAAGATAATTCCAGAGTACTATCCTTATGGTAGTAGGGGTCCTGTTGGTGCTCACTATCTTGCAGCCCGACACAACGTCCGGTGGGGTGACCTTGGCACAGACGTATACCAATAG 1821 0.4382 MATTTLYSTHCRSLVTSSSSSSSASSLQPCPLSSNLQRVTFSQRFLASKVSLKSQPQPYQIPVHTQQHEGRVNVGTVAAAVENGTSHQQLKADLLSVKSPEKSRAEDGFDKDENKSTVSITIVGASGDLAKKKIFPALFALYYEDCLPKHFTIYGYARSKMTDAELRNMVSKTLTCRIDKRENCNEKMDQFLKRCFYHSGQYDSQDNFAALDKKLKEHEGGRTSNRLFYLSIPPNIFIDAVKCASLSASAGNGWTRVIVEKPFGRDSESSAALTKSLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPLRLEDVIIGQYKSHTRGGVTYPAYVDDKTVPSGSLTPTFAAASLFINNARWDGVPFLMKAGKALHNKRAEIRVQFRHVPGNLYNRNFGADLDRATNELVIRVQPDEAIYLKINNKVPGLGMKLDRSNLNLHYAARYSNEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPVLKELEEKKIIPEYYPYGSRGPVGAHYLAARHNVRWGDLGTDVYQ 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0162 606 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 290 296 IPR019796 GO:0004345|GO:0006006
Aed3g0162 606 PRINTS Glucose-6-phosphate dehydrogenase signature 280 308 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aed3g0162 606 PRINTS Glucose-6-phosphate dehydrogenase signature 437 463 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aed3g0162 606 PRINTS Glucose-6-phosphate dehydrogenase signature 332 349 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aed3g0162 606 PRINTS Glucose-6-phosphate dehydrogenase signature 350 366 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aed3g0162 606 PRINTS Glucose-6-phosphate dehydrogenase signature 256 269 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aed3g0162 606 Gene3D Dihydrodipicolinate Reductase; domain 2 289 598 - -
Aed3g0162 606 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 122 300 IPR022674 GO:0006006|GO:0016614|GO:0050661
Aed3g0162 606 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 303 597 IPR022675 GO:0004345|GO:0006006|GO:0050661
Aed3g0162 606 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 20 603 - -
Aed3g0162 606 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 116 303 IPR036291 -
Aed3g0162 606 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 290 597 - -
Aed3g0162 606 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 117 599 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aed3g0162 606 Gene3D - 114 288 - -
Aed3g0162 606 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 20 603 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aed3g0162 606 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 118 598 IPR001282 GO:0006006|GO:0016614|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0162 Aed-Chr3 1170379 1175110 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0162 K00036 - gmx:100815891 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0162 3 1170379 1175110 Aed3g0162 3 1170379 1175110 ECH