Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0012 ATGGTTATCAGTCACCGTACTTTGGCATTTACATTTGGCATGCTAGGTAACGTCATTTCTTTCTTGGTATTCTTGGCTCCAGTGCCAACATTTTACCGGATATACAAGAAGAAATCGACGGAAAGTTTTCAGTCACTGCCTTACTTGGTGGCATTATTTAGTTCAATGCTTTGGTTGTACTATGCGTTGCTCAAAACAGATGCTGTTCTCCTCATTACCATTAACTCTTTCGGATGTGTTATAGAGATTATCTACATCGCCTTGTACATCACCTATGCAACCAGAGATGCTAGGAACTTAACTATTAAGCTATTTTCGGCGATGAACGTGAGCTCCTTTGCTTTGATACTCTTAGTCACACACTTTGCTGTGCATGGTCCCCTTCGTGTCCAAGTCCTCGGATGGATTTGTGTTTCCATTTCAGTTAGTGTCTTTGCAGCGCCACTAAGCATTGTGGCACAAGTTGTTCGCACAAAGAGTGTAGAGTTTATGCCTTTCAATTTGTCATTTACCCTAACATTGAGTGCCATAATGTGGTTTGGTTATGGTCTCTTTCTCAAGGACATATGCATTGCTCTCCCAAACGTGCTTGGTTTTGTGCTGGGGTTACTTCAAATGCTGCTCTACACAATTTACAGAAATGGAAATAAAAAGACTAACAGAAACGAAAAGAATAGTCCACCACAGCCACTCAAAAACATTGCTGTAGTGAACCCGTTGGTGGGAACTGGAGAAGTGTTTCCTGTGGAGGAGGAAGATGATGAACAAGCAAAAAAGAGCCAAGGATCAGATGGAGAGGATGAGAAAAAGGGTGGAGATTGCGTAGTCTAA 831 0.4188 MVISHRTLAFTFGMLGNVISFLVFLAPVPTFYRIYKKKSTESFQSLPYLVALFSSMLWLYYALLKTDAVLLITINSFGCVIEIIYIALYITYATRDARNLTIKLFSAMNVSSFALILLVTHFAVHGPLRVQVLGWICVSISVSVFAAPLSIVAQVVRTKSVEFMPFNLSFTLTLSAIMWFGYGLFLKDICIALPNVLGFVLGLLQMLLYTIYRNGNKKTNRNEKNSPPQPLKNIAVVNPLVGTGEVFPVEEEDDEQAKKSQGSDGEDEKKGGDCVV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0012 276 MobiDBLite consensus disorder prediction 252 276 - -
Aed3g0012 276 Pfam Sugar efflux transporter for intercellular exchange 131 214 IPR004316 GO:0016021
Aed3g0012 276 Pfam Sugar efflux transporter for intercellular exchange 11 95 IPR004316 GO:0016021
Aed3g0012 276 Gene3D - 129 227 - -
Aed3g0012 276 MobiDBLite consensus disorder prediction 247 276 - -
Aed3g0012 276 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 15 270 - -
Aed3g0012 276 Gene3D - 11 99 - -
Aed3g0012 276 PANTHER RAG1-ACTIVATING PROTEIN 1 15 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0012 Aed-Chr3 116796 118233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0012 1 270 Miscellaneous Gene Families AT5G13170 66.790 2.77e-124 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0012 K15382 - gmx:100779335 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0012 3 116796 118233 Aed3g0012 3 116796 118233 ECH