Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0005 ATGAAGAGCTCTCTGAAAAAGTTACGAGGTCTGGCACTTCACAATCACAACCACAAGCATGCCTCCTCCAAGTCCATTCAGCCTCTGGGCCAGCTTGACGAGCTCGCTCGGGCTACAAAGGATATGCAAGATATGAGGGACTGCTATGACACCTTGCTTTCCGCCGCAGCAGCAACCGCCAGCAGTGCTTATGAATTCTCCGAGTCCTTGCGGGACATGGGCTCTTGCCTTCTTGAGAAGACCGCTTTAAATGATCACGGAGATGAAACTGGTAAACTTCTCCTCATGCTTGGCAAAATCCAGTTCAAACTCCACAAACTCATTGATCACTATCGTTCTCATATATTCCAGACAATTACCATTCCCTCCGAGTCTCTCTTGAATGAACTTCGAATTGTAGAGGAGATGAAGCGACAATGTGATGAGAAAAGGTTTGAAATAGACTTGTATGAGTATATGGTAACAAGATATAGAGAAGGAAGCAGGTCTAAAGGTGGGAAAGGGGAGACTTTTTCGTTGCAGCAGTTGCAAACTGCTCATGATGAATATGATGAAGAGGCTACATTGTTTGTTTTCCGATTGAAATCTCTGAAGCAAGGACAATCGCGCAGTCTTCTAACACAGGCAGCACGGCACCATGCTGCTCAGTTATGTTTCTTCAAGAAAGCAGTCAAGTCCCTTGAGACAGTAGAACCACATGTAAAATCAGTAACTGAACAGCAACACATTGATTACCGCTTCAGTGGTCTTGAAGAGGAGGATGGGGATGAAGGGGATTATGGAGATGGTGATGGTGGTGGTGGTGGTTATGATGAGAATGATGATGGGGAGCTGAGTTTTGACTATGGACAAATTGAACAAGACCAAGATGTTTCTACATCACGAAACTCAATGGAGTTGGATCAAGTGGAACTTACACTTCCTAGAGGTTCTACAGCTGAAGCTTCTAAGGAAAACTTGGATAACCTTCAAAGGAATTTGTTTTCCTTTAAGGTTAGGACAGGGAGCCAATCTGCCCCACTTTTTGCTGATAATAAACCTGATGCAAGTGAAAAACTGAGACAGATGCGCCCATCTTTATCGCGGAAGTTCAGCTCATATGTGCTACCCACACCAGTTGATGCTAAGAGTTCAACCTCTTCAGGGTCAAATAATCCAAAGCCTTCCAAAATGCAGGCAAATTTAAGTGAACCTACAAAGAACTTGTGGCATTCATCCCCATTGGAACAAAAGAAACATGAAAAAGATATTGGTGATGTGTTTTCTGGTTCAGTTGTCAGAAGTGCACAGTCAGTACTCAAGGAAAGTAATAGCAATACTGCCTCCACTAGATTTCCACCTCCTTTAGTAGATAGTCTTTTATCCTCAAGTCGTGATTACATTTCTGCTTATTCTAAAAAGATTAAAAGACATGCCTTTTCTGGCCCATTGACAAGTAATTCTGGGCCTACCAAGCCAGTCTCTCTAGAAAGTATCCAACTGTTCTCTGGACCTCTTTTGCCTACTCCAATTCCTCAGCCTCCGTCATCATCTCCAAAAGTATCTCCTAGTGCTTCTCCCACTCTTATGTCTTCACCCAAAATAAGTGAGCTTCATGAACTTCCTAGGCCTCCAACCAGTTTCCCCTCCAATTCAAGGCTTTTAGGTTTGGTGGGTCATTCTGGTCCATTGGTGTCTAGAGGTCAAAAGGTTTCGACTGCAAATAATTTGGTTGCATCAAGTGCAGCATCTCCACTGCCAATGCCACCTCAGGCCATGGCTCGTAGTTTTTCCATACCTTCTAGTGGCACTAGAGTGGCAGCATTACATGTGCCAAGAACACTAGAATCCTCTCATAGATCATCTATATCTGAGAATATTGCTTCCCCTACCCTGATGCCAATAGCATTGTCTAGTAGTCAGCCATCATCAGATGGCTGA 1920 0.4385 MKSSLKKLRGLALHNHNHKHASSKSIQPLGQLDELARATKDMQDMRDCYDTLLSAAAATASSAYEFSESLRDMGSCLLEKTALNDHGDETGKLLLMLGKIQFKLHKLIDHYRSHIFQTITIPSESLLNELRIVEEMKRQCDEKRFEIDLYEYMVTRYREGSRSKGGKGETFSLQQLQTAHDEYDEEATLFVFRLKSLKQGQSRSLLTQAARHHAAQLCFFKKAVKSLETVEPHVKSVTEQQHIDYRFSGLEEEDGDEGDYGDGDGGGGGYDENDDGELSFDYGQIEQDQDVSTSRNSMELDQVELTLPRGSTAEASKENLDNLQRNLFSFKVRTGSQSAPLFADNKPDASEKLRQMRPSLSRKFSSYVLPTPVDAKSSTSSGSNNPKPSKMQANLSEPTKNLWHSSPLEQKKHEKDIGDVFSGSVVRSAQSVLKESNSNTASTRFPPPLVDSLLSSSRDYISAYSKKIKRHAFSGPLTSNSGPTKPVSLESIQLFSGPLLPTPIPQPPSSSPKVSPSASPTLMSSPKISELHELPRPPTSFPSNSRLLGLVGHSGPLVSRGQKVSTANNLVASSAASPLPMPPQAMARSFSIPSSGTRVAALHVPRTLESSHRSSISENIASPTLMPIALSSSQPSSDG 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0005 639 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 638 IPR037488 -
Aed3g0005 639 MobiDBLite consensus disorder prediction 338 416 - -
Aed3g0005 639 MobiDBLite consensus disorder prediction 498 524 - -
Aed3g0005 639 CDD BAR 64 233 - -
Aed3g0005 639 PANTHER BNAA05G10100D PROTEIN 1 638 - -
Aed3g0005 639 MobiDBLite consensus disorder prediction 249 278 - -
Aed3g0005 639 MobiDBLite consensus disorder prediction 500 514 - -
Aed3g0005 639 SUPERFAMILY BAR/IMD domain-like 34 236 IPR027267 -
Aed3g0005 639 MobiDBLite consensus disorder prediction 359 405 - -
Aed3g0005 639 MobiDBLite consensus disorder prediction 608 639 - -
Aed3g0005 639 MobiDBLite consensus disorder prediction 605 639 - -
Aed3g0005 639 Gene3D Arfaptin homology (AH) domain/BAR domain 31 253 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0005 Aed-Chr3 51715 58552 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0005 - - gmx:100778278 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0005 3 51715 58552 Aed3g0005 3 51715 58552 ECH